RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PACS1Q6VY07 963 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 TAOK1Q7L7X3 1001 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 EXOC3L1Q86VI1 746 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 RALGPS2Q86X27 583 aaPredicted RBP13.48□□□□□ -0.25
VMP1-217ENST00000593168 TTC30BQ8N4P2 665 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 ARFGAP2Q8N6H7 521 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 GABPB2Q8TAK5 448 aaPredicted RBP13.48□□□□□ -0.25
VMP1-217ENST00000593168 CALML6Q8TD86 181 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 MZB1Q8WU39 189 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 MTBPQ96DY7 904 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 ZDHHC6Q9H6R6 413 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 SENP1Q9P0U3 644 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 DKK3Q9UBP4 350 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 IL36AQ9UHA7 158 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 ARL5AQ9Y689 179 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 MYLKQ15746 1914 aa13.48□□□□□ -0.25
VMP1-217ENST00000593168 CCDC78A2IDD5 438 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 SPECC1L-ADORA2AF8WAN1 911 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 MAN2B1O00754 1011 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 SLC30A4O14863 429 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 AURKAO14965 403 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 UGT1A9O60656 530 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 RPP40O75818 363 aaKnown RBP13.47□□□□□ -0.25
VMP1-217ENST00000593168 PRNPP04156 253 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 SNRPAP09012 282 aaKnown RBP13.47□□□□□ -0.25
VMP1-217ENST00000593168 KRT15P19012 456 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 NFKBIAP25963 317 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 CTHP32929 405 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 HMGCLP35914 325 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 SOX9P48436 509 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 ZNF140P52738 457 aaPredicted RBP13.47□□□□□ -0.25
VMP1-217ENST00000593168 CSE1LP55060 971 aaKnown RBP13.47□□□□□ -0.25
VMP1-217ENST00000593168 DMWDQ09019 674 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 DNAJC3Q13217 504 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 THOC5Q13769 683 aaKnown RBP13.47□□□□□ -0.25
VMP1-217ENST00000593168 ENPP2Q13822 863 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 ARSIQ5FYB1 569 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 C9orf64Q5T6V5 341 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 NEPROQ6NW34 567 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 SERPINA13PQ6UXR4 307 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 MAMSTRQ6ZN01 415 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 PRR23BQ6ZRT6 265 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 TRABD2AQ86V40 505 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 ZSWIM9Q86XI8 627 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 SFTPA1Q8IWL2 248 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 PAF1Q8N7H5 531 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 TMIEQ8NEW7 156 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 FAM76AQ8TAV0 307 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 NETO1Q8TDF5 533 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 KCNV2Q8TDN2 545 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 SCG3Q8WXD2 468 aaKnown RBP13.47□□□□□ -0.25
VMP1-217ENST00000593168 SCRN2Q96FV2 425 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 CDKN2AIPNLQ96HQ2 116 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 KLHL32Q96NJ5 620 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 FAM167BQ9BTA0 163 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 MTG2Q9H4K7 406 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 LMAN1LQ9HAT1 526 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 UGT1A7Q9HAW7 530 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 UGT1A10Q9HAW8 530 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 UGT1A8Q9HAW9 530 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 FBRSL1Q9HCM7 1045 aaKnown RBP13.47□□□□□ -0.25
VMP1-217ENST00000593168 IARS2Q9NSE4 1012 aaKnown RBP13.47□□□□□ -0.25
VMP1-217ENST00000593168 NLE1Q9NVX2 485 aaPredicted RBP13.47□□□□□ -0.25
VMP1-217ENST00000593168 IL1RAPL1Q9NZN1 696 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 TXNDC16Q9P2K2 825 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 HCN2Q9UL51 889 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 RAB23Q9ULC3 237 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 ZNF711Q9Y462 761 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 KCTD3Q9Y597 815 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 USP24Q9UPU5 2620 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 CHD8Q9HCK8 2581 aa13.47□□□□□ -0.25
VMP1-217ENST00000593168 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.46□□□□□ -0.25
VMP1-217ENST00000593168 CAPN8A6NHC0 703 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 H7C0S8 307 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 STX7O15400 261 aaKnown RBP13.46□□□□□ -0.25
VMP1-217ENST00000593168 LEFTY1O75610 366 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 RETP07949 1114 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 CTPS1P17812 591 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 NR1D1P20393 614 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 SPRP35270 261 aaPredicted RBP13.46□□□□□ -0.25
VMP1-217ENST00000593168 HNF1BP35680 557 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 HADHAP40939 763 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 IL12RB1P42701 662 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 ARSDP51689 593 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 PRAMEP78395 509 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 SATB1Q01826 763 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 GAS6Q14393 721 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 CDKN3Q16667 212 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 UGP2Q16851 508 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 ZNF805Q5CZA5 627 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 TIFABQ6ZNK6 161 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 KIAA0408Q6ZU52 694 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 USP45Q70EL2 814 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 STRA8Q7Z7C7 330 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 GALNT7Q86SF2 657 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 OR4K2Q8NGD2 314 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 GRIN3AQ8TCU5 1115 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 OR8D1Q8WZ84 308 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 FAM3CQ92520 227 aa13.46□□□□□ -0.25
VMP1-217ENST00000593168 HDAC10Q969S8 669 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms