RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 CAPN6Q9Y6Q1 641 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 PCNX2A6NKB5 2137 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 TRPM6Q9BX84 2022 aa10.07□□□□□ -0.8
BRCA1-227ENST00000591849 A0A0U1RQS6 177 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 TRIM38O00635 465 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 SCAMP1O15126 338 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 DDX3YO15523 660 aaKnown RBP10.06□□□□□ -0.8
BRCA1-227ENST00000591849 SIGLEC6O43699 453 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 HYAL3O43820 417 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-227ENST00000591849 ANXA9O76027 345 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 ASMTLO95671 621 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 NDST3O95803 873 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 MT-CYBP00156 380 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-227ENST00000591849 PRLP01236 227 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 PYGLP06737 847 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 MMP2P08253 660 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 CKMT2P17540 419 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 LHCGRP22888 699 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 PMLP29590 882 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 STC1P52823 247 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 GEMP55040 296 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 WNT3AP56704 352 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 PTSQ03393 145 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 ELOCQ15369 112 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 TCEA2Q15560 299 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 SLC14A2Q15849 920 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 TPRG1LQ5T0D9 272 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 ESRP1Q6NXG1 681 aaKnown RBP10.06□□□□□ -0.8
BRCA1-227ENST00000591849 GLRX5Q86SX6 157 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 SLCO6A1Q86UG4 719 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 GKN2Q86XP6 184 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 NRSN1Q8IZ57 195 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 RBFAQ8N0V3 343 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 SLC25A45Q8N413 288 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 FSTL5Q8N475 847 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-227ENST00000591849 SLC25A41Q8N5S1 370 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 ZNF548Q8NEK5 533 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-227ENST00000591849 IPMKQ8NFU5 416 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 TRIM58Q8NG06 486 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 OR56A4Q8NGH8 313 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 FUBP1Q96AE4 644 aaKnown RBP10.06□□□□□ -0.8
BRCA1-227ENST00000591849 AP2M1Q96CW1 435 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 HES6Q96HZ4 224 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 SMIM14Q96QK8 99 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 FCRL5Q96RD9 977 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 RIOK2Q9BVS4 552 aaKnown RBP10.06□□□□□ -0.8
BRCA1-227ENST00000591849 ABCG8Q9H221 673 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 FAM83DQ9H4H8 585 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 ZFYVE1Q9HBF4 777 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 RAD18Q9NS91 495 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 NLGN3Q9NZ94 848 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 SHOC2Q9UQ13 582 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 PPP2R2CQ9Y2T4 447 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 CSNK1G3Q9Y6M4 447 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 CABIN1Q9Y6J0 2220 aa10.06□□□□□ -0.8
BRCA1-227ENST00000591849 K7ESM1 405 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 RFPL3O75679 317 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 HOXC4P09017 264 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-227ENST00000591849 C1SP09871 688 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 PIRTP0C851 137 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 CDK4P11802 303 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 MYCLP1P12525 358 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-227ENST00000591849 SPINK2P20155 84 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 CD68P34810 354 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-227ENST00000591849 RPIAP49247 311 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 HK3P52790 923 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 KIAA1024LP59773 190 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 CCZ1BP86790 482 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 CCZ1P86791 482 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-227ENST00000591849 DNAJC3Q13217 504 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 MPP3Q13368 585 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 IHHQ14623 411 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 ALG11Q2TAA5 492 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 DEFB133Q30KQ1 61 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 ANKRD20A2Q5SQ80 823 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 ANKRD20A1Q5TYW2 823 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 ANKRD20A3Q5VUR7 823 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 DOK6Q6PKX4 331 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 ARHGEF18Q6ZSZ5 1173 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 RFLNAQ6ZTI6 216 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 TECPR1Q7Z6L1 1165 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 TAF8Q7Z7C8 310 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 HEATR4Q86WZ0 1026 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 OR4C6Q8NH72 309 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 BAHD1Q8TBE0 780 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-227ENST00000591849 ADAMTS14Q8WXS8 1223 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 SCAMP4Q969E2 229 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 PPP1R2P1Q96PQ5 205 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 HERPUD2Q9BSE4 406 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 TCEAL2Q9H3H9 227 aaPredicted RBP10.05□□□□□ -0.8
BRCA1-227ENST00000591849 MAGEE1Q9HCI5 957 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 CYP4F12Q9HCS2 524 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 GPR27Q9NS67 375 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 NCKIPSDQ9NZQ3 722 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 GULP1Q9UBP9 304 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 KLF15Q9UIH9 416 aa10.05□□□□□ -0.8
BRCA1-227ENST00000591849 AAR2Q9Y312 384 aaKnown RBP10.05□□□□□ -0.8
BRCA1-227ENST00000591849 PLXNA2O75051 1894 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 ZFHX4Q86UP3 3567 aa10.04□□□□□ -0.8
BRCA1-227ENST00000591849 CPED1A4D0V7 1026 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms