RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 CCR5P51681 352 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 PARP6Q2NL67 630 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 CCDC157Q569K6 752 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 ERAP2Q6P179 960 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 CCDC137Q6PK04 289 aaKnown RBP21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 DPPA4Q7L190 304 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 GSTA5Q7RTV2 222 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 TRIM69Q86WT6 500 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 KLHDC8BQ8IXV7 354 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 CCDC89Q8N998 374 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 MCCC1Q96RQ3 725 aaPredicted RBP21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 APOL2Q9BQE5 337 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 FICDQ9BVA6 458 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 DDX47Q9H0S4 455 aaKnown RBP21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 ANKRD6Q9Y2G4 727 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 COQ6Q9Y2Z9 468 aa21.51■■□□□ 1.03
R3HDM4-206ENST00000590454 A0A0J9YYE9 177 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 LOC285095A0A1B0GVY8 99 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 PCDHGA12O60330 932 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 USP12O75317 370 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 TRBC1P01850 177 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 PRB1P04280 392 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 PIRTP0C851 137 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 CA4P22748 312 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 ADRA1AP35348 466 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 LIG3P49916 1009 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 CCT8P50990 548 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 SUOXP51687 545 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 EPHB1P54762 984 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 ELP6Q0PNE2 266 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 MPP3Q13368 585 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 NEK5Q6P3R8 708 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 DHRS13Q6UX07 377 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 TMPRSS12Q86WS5 348 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 SLC25A41Q8N5S1 370 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 ATL2Q8NHH9 583 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 SLC39A7Q92504 469 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 IFT43Q96FT9 208 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 SCRN2Q96FV2 425 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 FEM1CQ96JP0 617 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 ETNK1Q9HBU6 452 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 FZD3Q9NPG1 666 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 CA5BQ9Y2D0 317 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 NEU2Q9Y3R4 380 aa21.5■■□□□ 1.03
R3HDM4-206ENST00000590454 CELSR3Q9NYQ7 3312 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 GOLGA6L10A0A0M3HER8 536 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 A0A1W2PQ67 120 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 ANKRD66B4E2M5 251 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 SLC31A1O15431 190 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 ANXA9O76027 345 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 NDST3O95803 873 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 GM2AP17900 193 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 GRIA4P48058 902 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 GEMP55040 296 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 RPS21P63220 83 aaKnown RBP21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 CNGA3Q16281 694 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 SIRPB2Q5JXA9 342 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 KCTD11Q693B1 232 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 KIAA1161Q6NSJ0 714 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 CRTC1Q6UUV9 634 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 LIPIQ6XZB0 460 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 KDM7AQ6ZMT4 941 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 KLHL7Q8IXQ5 586 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 CXorf40AQ8TE69 158 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 MYOCQ99972 504 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 C1QTNF2Q9BXJ5 285 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 TM9SF3Q9HD45 589 aa21.49■■□□□ 1.03
R3HDM4-206ENST00000590454 A0A1W2PPC4 97 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 CAPN8A6NHC0 703 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 RAD51BO15315 384 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 PAK4O96013 591 aaPredicted RBP21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 C6P13671 934 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 CD27P26842 260 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 VIPR1P32241 457 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 PAFAH1B1P43034 410 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 RPL26P61254 145 aaKnown RBP21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 PRPSAP1Q14558 356 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 SLC1A5Q15758 541 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 CDKN3Q16667 212 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 INAVAQ3KP66 663 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 RFLNAQ6ZTI6 216 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 USP45Q70EL2 814 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 SLC6A18Q96N87 628 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 ADGRE3Q9BY15 652 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 SLC17A9Q9BYT1 436 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 RAB6BQ9NRW1 208 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 RPL26L1Q9UNX3 145 aaKnown RBP21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 SPO11Q9Y5K1 396 aa21.48■■□□□ 1.03
R3HDM4-206ENST00000590454 ATXN7O15265 892 aaPredicted RBP21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 URI1O94763 535 aaPredicted RBP21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 HEXIM1O94992 359 aaKnown RBP21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 KRT14P02533 472 aa21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 FNTAP49354 379 aa21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 VPS41P49754 854 aa21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 DENND2CQ68D51 928 aa21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 LAYNQ6UX15 382 aa21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 RANBP10Q6VN20 620 aa21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 LRRC69Q6ZNQ3 347 aa21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 HSD11B1LQ7Z5J1 315 aa21.47■■□□□ 1.03
R3HDM4-206ENST00000590454 NXPE2Q96DL1 559 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms