RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 SLC22A18ASQ8N1D0 253 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 TAB3Q8N5C8 712 aaPredicted RBP21.28■■□□□ 1
ATG4D-212ENST00000590096 PLA2G15Q8NCC3 412 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 TRIM44Q96DX7 344 aaPredicted RBP21.28■■□□□ 1
ATG4D-212ENST00000590096 TBL1YQ9BQ87 522 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 TRABDQ9H4I3 376 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 GPR27Q9NS67 375 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 TM7SF3Q9NS93 570 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 SMARCAL1Q9NZC9 954 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 PAK5Q9P286 719 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 CD84Q9UIB8 345 aa21.28■■□□□ 1
ATG4D-212ENST00000590096 SPTY2D1-AS1A0A0U1RR47 76 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 YKT6O15498 198 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 TSHRP16473 764 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 ADRA1AP35348 466 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 KCNJ1P48048 391 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 SLC14A1Q13336 389 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 PRAMEF14Q5SWL7 426 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 RAET1GQ6H3X3 334 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 PNCKQ6P2M8 343 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 KDM7AQ6ZMT4 941 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 ZNF765Q7L2R6 523 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 ATL2Q8NHH9 583 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 MAGOHBQ96A72 148 aaKnown RBP21.27■■□□□ 1
ATG4D-212ENST00000590096 AP2M1Q96CW1 435 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 APOL2Q9BQE5 337 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 APOOQ9BUR5 198 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 LRRC40Q9H9A6 602 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 HACD3Q9P035 362 aa21.27■■□□□ 1
ATG4D-212ENST00000590096 DNAH14Q0VDD8 3507 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 A0A1B0GTQ1 180 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 RGSL1A5PLK6 1076 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 CACNB4O00305 520 aaPredicted RBP21.26■□□□□ 0.99
ATG4D-212ENST00000590096 ETS1P14921 441 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 HTR1BP28222 390 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 SPINT3P49223 89 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 LMAN1P49257 510 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 DPTQ07507 201 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 SPARCL1Q14515 664 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 SUZ12Q15022 739 aaKnown RBP21.26■□□□□ 0.99
ATG4D-212ENST00000590096 C4orf22Q6V702 233 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 RANBP10Q6VN20 620 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 PARGQ86W56 976 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 KLHDC8BQ8IXV7 354 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 BLOC1S5Q8TDH9 187 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 CAPZA3Q96KX2 299 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 RTKNQ9BST9 563 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 ABCG8Q9H221 673 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 WDR26Q9H7D7 661 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 RAD18Q9NS91 495 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 OR1A2Q9Y585 309 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 SPO11Q9Y5K1 396 aa21.26■□□□□ 0.99
ATG4D-212ENST00000590096 ERI2A8K979 691 aaKnown RBP21.25■□□□□ 0.99
ATG4D-212ENST00000590096 E7EVH7 732 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 AP2A1O95782 977 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 PYGLP06737 847 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 CASQ1P31415 396 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 GPR1P46091 355 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 RXRGP48443 463 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 IL9RQ01113 521 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 FZD2Q14332 565 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 NFATC4Q14934 902 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 HS1BP3Q53T59 392 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 KCTD11Q693B1 232 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 MACC1Q6ZN28 852 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 RFLNAQ6ZTI6 216 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 GLT6D1Q7Z4J2 308 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 TMC3Q7Z5M5 1100 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 PRUNE1Q86TP1 453 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 PDCD7Q8N8D1 485 aaKnown RBP21.25■□□□□ 0.99
ATG4D-212ENST00000590096 ETNK1Q9HBU6 452 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 RAB6BQ9NRW1 208 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 DNAJC28Q9NX36 388 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 FEZ2Q9UHY8 353 aaPredicted RBP21.25■□□□□ 0.99
ATG4D-212ENST00000590096 PCDHGB2Q9Y5G2 931 aa21.25■□□□□ 0.99
ATG4D-212ENST00000590096 ASCC3Q8N3C0 2202 aaKnown RBP21.24■□□□□ 0.99
ATG4D-212ENST00000590096 K7ESM1 405 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 PHF2O75151 1096 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 USP12O75317 370 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 ZSCAN5DPP0CG00 497 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 RPL22P35268 128 aaKnown RBP21.24■□□□□ 0.99
ATG4D-212ENST00000590096 TRIM23P36406 574 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 COILP38432 576 aaPredicted RBP21.24■□□□□ 0.99
ATG4D-212ENST00000590096 KIAA1024LP59773 190 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 ETF1P62495 437 aaKnown RBP21.24■□□□□ 0.99
ATG4D-212ENST00000590096 OLIG2Q13516 323 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 CYP1B1Q16678 543 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 TPRG1LQ5T0D9 272 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 CCDC137Q6PK04 289 aaKnown RBP21.24■□□□□ 0.99
ATG4D-212ENST00000590096 LINC00523Q86TU6 105 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 NLRP8Q86W28 1048 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 GLIS1Q8NBF1 620 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 SCAMP4Q969E2 229 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 RIOK2Q9BVS4 552 aaKnown RBP21.24■□□□□ 0.99
ATG4D-212ENST00000590096 CDH19Q9H159 772 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 FAM83DQ9H4H8 585 aa21.24■□□□□ 0.99
ATG4D-212ENST00000590096 PHPT1Q9NRX4 125 aaPredicted RBP21.24■□□□□ 0.99
ATG4D-212ENST00000590096 CABIN1Q9Y6J0 2220 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 H3BM21 787 aa21.23■□□□□ 0.99
ATG4D-212ENST00000590096 PDE2AO00408 941 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms