RNA–Protein interactions for RNA: ENST00000589254.1

USP36-215, Transcript of ubiquitin specific peptidase 36, human

TSL 3

Gene USP36, Length 565 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP36-215	ENST00000589254	PRKAR1A	P10644	381 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	FGF3	P11487	239 aa	Predicted RBP	11.43	□□□□□ -0.58
USP36-215	ENST00000589254	PCK1	P35558	622 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	CCR10	P46092	362 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	CDH4	P55283	916 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	HDAC4	P56524	1084 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	RPS6KA1	Q15418	735 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	SLC25A52	Q3SY17	297 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	RAB6C	Q53S08	254 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	CARD16	Q5EG05	197 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	EFHC2	Q5JST6	749 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.43	□□□□□ -0.58
USP36-215	ENST00000589254	STRADA	Q7RTN6	431 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	POLN	Q7Z5Q5	900 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	ARFGAP1	Q8N6T3	406 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	DCAF4L2	Q8NA75	395 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	KIF18A	Q8NI77	898 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	ALG3	Q92685	438 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	NT5C3B	Q969T7	300 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	ABHD17A	Q96GS6	310 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	PEBP4	Q96S96	227 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	EPAS1	Q99814	870 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	HEPH	Q9BQS7	1158 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	NUDT22	Q9BRQ3	303 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	WRAP53	Q9BUR4	548 aa	Known RBP	11.43	□□□□□ -0.58
USP36-215	ENST00000589254	RAB6C	Q9H0N0	254 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	PIGV	Q9NUD9	493 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	RRN3	Q9NYV6	651 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	ANAPC2	Q9UJX6	822 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	SNX12	Q9UMY4	172 aa		11.43	□□□□□ -0.58
USP36-215	ENST00000589254	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.43	□□□□□ -0.58
USP36-215	ENST00000589254	CCDC66	A2RUB6	948 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	AREL1	O15033	823 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	DDX3Y	O15523	660 aa	Known RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	B4GAT1	O43505	415 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	SEMA7A	O75326	666 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	RNF8	O76064	485 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	KRT1	P04264	644 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	GNLY	P22749	145 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	IL1R2	P27930	398 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	OAS2	P29728	719 aa	Known RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	MIP	P30301	263 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	CCR1	P32246	355 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	UGT1A3	P35503	534 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	ACVRL1	P37023	503 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	SSR1	P43307	286 aa	Known RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	CD97	P48960	835 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	SERPINH1	P50454	418 aa	Known RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	HK3	P52790	923 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	OXCT1	P55809	520 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	B4GALNT1	Q00973	533 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	LRRC38	Q5VT99	294 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	PAPD7	Q5XG87	772 aa	Known RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	RHOT1	Q8IXI2	618 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	UNC5B	Q8IZJ1	945 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	UBL4B	Q8N7F7	174 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	DENND6B	Q8NEG7	585 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	CENPI	Q92674	756 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	PGAP3	Q96FM1	320 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	PPP1R16A	Q96I34	528 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	TBATA	Q96M53	351 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	NCAPG	Q9BPX3	1015 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	SPON2	Q9BUD6	331 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	C2orf49	Q9BVC5	232 aa	Predicted RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	MRPL40	Q9NQ50	206 aa	Known RBP	11.42	□□□□□ -0.58
USP36-215	ENST00000589254	TMEM9	Q9P0T7	183 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	DOLK	Q9UPQ8	538 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	PCDHB11	Q9Y5F2	797 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	B3GALT1	Q9Y5Z6	326 aa		11.42	□□□□□ -0.58
USP36-215	ENST00000589254	HIVEP3	Q5T1R4	2406 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254		M0QYT0	321 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	TSPAN6	O43657	245 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	PRPSAP2	O60256	369 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	UGT2B4	P06133	528 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	TCP1	P17987	556 aa	Known RBP	11.41	□□□□□ -0.58
USP36-215	ENST00000589254	MPST	P25325	297 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	MAZ	P56270	477 aa	Known RBP	11.41	□□□□□ -0.58
USP36-215	ENST00000589254	OR1D5	P58170	312 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	SMTNL2	Q2TAL5	461 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	WSCD2	Q2TBF2	565 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	CERCAM	Q5T4B2	595 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	11.41	□□□□□ -0.58
USP36-215	ENST00000589254	TXNRD3NB	Q6F5E7	133 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	ENPP7	Q6UWV6	458 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	FAM131B	Q86XD5	332 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	KATNAL2	Q8IYT4	538 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	UBE2Q2	Q8WVN8	375 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	ASB12	Q8WXK4	309 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	OR1E3	Q8WZA6	343 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	CCDC114	Q96M63	670 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	KLHL32	Q96NJ5	620 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	OSBPL9	Q96SU4	736 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	SNRNP25	Q9BV90	132 aa	Known RBP	11.41	□□□□□ -0.58
USP36-215	ENST00000589254	CARD9	Q9H257	536 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	NDFIP2	Q9NV92	336 aa		11.41	□□□□□ -0.58
USP36-215	ENST00000589254	HECA	Q9UBI9	543 aa	Predicted RBP	11.41	□□□□□ -0.58
USP36-215	ENST00000589254	SLC12A6	Q9UHW9	1150 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms