RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FICDQ9BVA6 458 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 ABCG8Q9H221 673 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 SMARCAL1Q9NZC9 954 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 CD84Q9UIB8 345 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 PNMA8BQ9ULN7 279 aaPredicted RBP20.18■□□□□ 0.82
DDX39A-207ENST00000588542 SHOC2Q9UQ13 582 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 DRG1Q9Y295 367 aaKnown RBP20.18■□□□□ 0.82
DDX39A-207ENST00000588542 ZNF711Q9Y462 761 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 OR1A2Q9Y585 309 aa20.18■□□□□ 0.82
DDX39A-207ENST00000588542 CES2O00748 559 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 PCDHGA12O60330 932 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 ETS1P14921 441 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 HLA-DPA1P20036 260 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 DPTQ07507 201 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 BNIP3Q12983 259 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 EIF2B5Q13144 721 aaKnown RBP20.17■□□□□ 0.82
DDX39A-207ENST00000588542 PUM1Q14671 1186 aaKnown RBP eCLIP20.17■□□□□ 0.82
DDX39A-207ENST00000588542 KCTD11Q693B1 232 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 KANSL1Q7Z3B3 1105 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 TMC3Q7Z5M5 1100 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 PRUNE1Q86TP1 453 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 GLIS1Q8NBF1 620 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 FUBP1Q96AE4 644 aaKnown RBP20.17■□□□□ 0.82
DDX39A-207ENST00000588542 PPP1R2P1Q96PQ5 205 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 FSD1LQ9BXM9 530 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 ZFYVE1Q9HBF4 777 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 KLF15Q9UIH9 416 aa20.17■□□□□ 0.82
DDX39A-207ENST00000588542 ZNF106Q9H2Y7 1883 aaKnown RBP20.17■□□□□ 0.82
DDX39A-207ENST00000588542 DCDC2BA2VCK2 349 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 AURKAO14965 403 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 ZNF185O15231 689 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 FANCGO15287 622 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 SH3BP5O60239 455 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 SOD1P00441 154 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 FGF1P05230 155 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 EPHA8P29322 1005 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-207ENST00000588542 KCNJ1P48048 391 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 SPINT3P49223 89 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 ARRB1P49407 418 aaPredicted RBP20.16■□□□□ 0.82
DDX39A-207ENST00000588542 THOP1P52888 689 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 ZNF542PQ5EBM4 170 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 FAXCQ5TGI0 409 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 DENND5AQ6IQ26 1287 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 MACC1Q6ZN28 852 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 NYAP1Q6ZVC0 841 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 ZNF765Q7L2R6 523 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 NLRP8Q86W28 1048 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 NRSN1Q8IZ57 195 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 ACTRT1Q8TDG2 376 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 SAP25Q8TEE9 199 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 SCAMP4Q969E2 229 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 APOL2Q9BQE5 337 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 HOMER3Q9NSC5 361 aa20.16■□□□□ 0.82
DDX39A-207ENST00000588542 PGRMC1O00264 195 aaKnown RBP20.15■□□□□ 0.82
DDX39A-207ENST00000588542 YKT6O15498 198 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 IFNB1P01574 187 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 CSF2P04141 144 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 HOXC4P09017 264 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-207ENST00000588542 TSHRP16473 764 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 PTK2BQ14289 1009 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 SPARCL1Q14515 664 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 NFATC4Q14934 902 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 PAPD7Q5XG87 772 aaKnown RBP20.15■□□□□ 0.82
DDX39A-207ENST00000588542 PARGQ86W56 976 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 GATAD2AQ86YP4 633 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 TTC30BQ8N4P2 665 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 TAB3Q8N5C8 712 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-207ENST00000588542 CCHCR1Q8TD31 782 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 AP2M1Q96CW1 435 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 CAMK1GQ96NX5 476 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 SRPK1Q96SB4 655 aaKnown RBP20.15■□□□□ 0.82
DDX39A-207ENST00000588542 AGAP2Q99490 1192 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 LGR4Q9BXB1 951 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 AP1M1Q9BXS5 423 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 TEX101Q9BY14 249 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 GPR63Q9BZJ6 419 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 PKD2L2Q9NZM6 624 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 BTBD3Q9Y2F9 522 aa20.15■□□□□ 0.82
DDX39A-207ENST00000588542 COL5A1P20908 1838 aaPredicted RBP20.15■□□□□ 0.82
DDX39A-207ENST00000588542 RGSL1A5PLK6 1076 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 USP12O75317 370 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 ZSCAN5DPP0CG00 497 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 NME1P15531 152 aaKnown RBP20.14■□□□□ 0.81
DDX39A-207ENST00000588542 CSRP1P21291 193 aaKnown RBP20.14■□□□□ 0.81
DDX39A-207ENST00000588542 TEAD1P28347 426 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 TNNT3P45378 269 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-207ENST00000588542 KIAA1024LP59773 190 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 MSLNQ13421 630 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-207ENST00000588542 RAET1GQ6H3X3 334 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 TTC27Q6P3X3 843 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 NAXDQ8IW45 347 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 NAPGQ99747 312 aaPredicted RBP20.14■□□□□ 0.81
DDX39A-207ENST00000588542 TBL1YQ9BQ87 522 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 RIOK2Q9BVS4 552 aaKnown RBP20.14■□□□□ 0.81
DDX39A-207ENST00000588542 TRABDQ9H4I3 376 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 WDR26Q9H7D7 661 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 ARNT2Q9HBZ2 717 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 DNAJC28Q9NX36 388 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 PLXNB3Q9ULL4 1909 aa20.14■□□□□ 0.81
DDX39A-207ENST00000588542 TMEM202A6NGA9 273 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms