RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 BBS5Q8N3I7 341 aa14.14□□□□□ -0.15
ERCC1-205ENST00000587888 FNIP1Q8TF40 1166 aa14.14□□□□□ -0.15
ERCC1-205ENST00000587888 PATE1Q8WXA2 126 aa14.14□□□□□ -0.15
ERCC1-205ENST00000587888 FRMD8Q9BZ67 464 aaPredicted RBP14.14□□□□□ -0.15
ERCC1-205ENST00000587888 CLMPQ9H6B4 373 aa14.14□□□□□ -0.15
ERCC1-205ENST00000587888 RTN4Q9NQC3 1192 aaKnown RBP14.14□□□□□ -0.15
ERCC1-205ENST00000587888 KCTD5Q9NXV2 234 aa14.14□□□□□ -0.15
ERCC1-205ENST00000587888 PHTF1Q9UMS5 762 aa14.14□□□□□ -0.15
ERCC1-205ENST00000587888 PLEKHM1Q9Y4G2 1056 aa14.14□□□□□ -0.15
ERCC1-205ENST00000587888 SCN8AQ9UQD0 1980 aa14.14□□□□□ -0.15
ERCC1-205ENST00000587888 TRBV23OR9-2A0A075B6M9 112 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 NPIPB15A6NHN6 443 aaPredicted RBP14.13□□□□□ -0.15
ERCC1-205ENST00000587888 ZW10O43264 779 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 MAFKO60675 156 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 SOCS5O75159 536 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 PEX11BO96011 259 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 FAM87AP0C7U9 286 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 GZMAP12544 262 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 TCF4P15884 667 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 WT1P19544 449 aaPredicted RBP14.13□□□□□ -0.15
ERCC1-205ENST00000587888 CR2P20023 1033 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 LHCGRP22888 699 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 MPSTP25325 297 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 NFKBIAP25963 317 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 CD1CP29017 333 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 CDK3Q00526 305 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 NFKB2Q00653 900 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 CTBSQ01459 385 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 ITKQ08881 620 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 KLHL30Q0D2K2 578 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 TRAF2Q12933 501 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 MARC1Q5VT66 337 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 NKAIN2Q5VXU1 208 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 RFLNAQ6ZTI6 216 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 TSPAN33Q86UF1 283 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 C17orf82Q86X59 251 aaPredicted RBP14.13□□□□□ -0.15
ERCC1-205ENST00000587888 CBARPQ8N350 705 aaPredicted RBP14.13□□□□□ -0.15
ERCC1-205ENST00000587888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.13□□□□□ -0.15
ERCC1-205ENST00000587888 NSMCE1Q8WV22 266 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 COL26A1Q96A83 441 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 DTD2Q96FN9 168 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 SCRN2Q96FV2 425 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 CCDC74BQ96LY2 380 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 MRPL47Q9HD33 250 aaKnown RBP14.13□□□□□ -0.15
ERCC1-205ENST00000587888 TRNAU1APQ9NX07 287 aaKnown RBP14.13□□□□□ -0.15
ERCC1-205ENST00000587888 AIPL1Q9NZN9 384 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 CD84Q9UIB8 345 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 TMEM98Q9Y2Y6 226 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 PCDHGA4Q9Y5G9 962 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 ST14Q9Y5Y6 855 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 SCINQ9Y6U3 715 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 ATMQ13315 3056 aa14.13□□□□□ -0.15
ERCC1-205ENST00000587888 IGHV5-10-1A0A0J9YXX1 117 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 A0A1W2PQC6 194 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 PPM1DO15297 605 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 WISP1O95388 367 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 ITGB2P05107 769 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 RARAP10276 462 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 PCK1P35558 622 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 HSPA9P38646 679 aaKnown RBP14.12□□□□□ -0.15
ERCC1-205ENST00000587888 ADCY8P40145 1251 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 MMP13P45452 471 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 GPR1P46091 355 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 PPM1FP49593 454 aaPredicted RBP14.12□□□□□ -0.15
ERCC1-205ENST00000587888 TYRO3Q06418 890 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 DPYSL2Q16555 572 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 TBR1Q16650 682 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 BOLA3Q53S33 107 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 ARMC12Q5T9G4 340 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 E4F1Q66K89 784 aaPredicted RBP14.12□□□□□ -0.15
ERCC1-205ENST00000587888 DTX1Q86Y01 620 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 NAGSQ8N159 534 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 ATPAF2Q8N5M1 289 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 GBP4Q96PP9 640 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 CSPG4P5Q96PW8 444 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 SMIM14Q96QK8 99 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 MGME1Q9BQP7 344 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 TRIM4Q9C037 500 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 NT5MQ9NPB1 228 aa14.12□□□□□ -0.15
ERCC1-205ENST00000587888 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.12□□□□□ -0.15
ERCC1-205ENST00000587888 HELZ2Q9BYK8 2649 aaKnown RBP14.12□□□□□ -0.15
ERCC1-205ENST00000587888 PGLSO95336 258 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 IVLP07476 585 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 PDHA1P08559 390 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 FGF3P11487 239 aaPredicted RBP14.11□□□□□ -0.15
ERCC1-205ENST00000587888 ACTR1BP42025 376 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 ACTR1AP61163 376 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 ANO6Q4KMQ2 910 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 FILIP1LQ4L180 1135 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 TXNRD3NBQ6F5E7 133 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 XKR5Q6UX68 686 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 USP45Q70EL2 814 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 MARK2Q7KZI7 788 aaKnown RBP14.11□□□□□ -0.15
ERCC1-205ENST00000587888 ZNF438Q7Z4V0 828 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 TECPR1Q7Z6L1 1165 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 TRIM74Q86UV6 250 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 PIH1D2Q8WWB5 315 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 TRIM11Q96F44 468 aa14.11□□□□□ -0.15
ERCC1-205ENST00000587888 BTBD6Q96KE9 485 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms