RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 TAF4O00268 1085 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 CAPN9O14815 690 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 SEC14L5O43304 696 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 CGAP01215 116 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 CYC1P08574 325 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 BDKRB2P30411 391 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 SHMT1P34896 483 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 PAFAH1B1P43034 410 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 CLCN3P51790 818 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 BRWD1-AS2P59051 145 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 PDE1BQ01064 536 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 BIRC3Q13489 604 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 NAE1Q13564 534 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 EIF2S3LQ2VIR3 472 aaKnown RBP4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 PDSS1Q5T2R2 415 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 ZNF449Q6P9G9 518 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 NFE4Q86UQ8 179 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 KBTBD3Q8NAB2 608 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 KLHL29Q96CT2 875 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 MAELQ96JY0 434 aaKnown RBP4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 UBXN10Q96LJ8 280 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 KLHL15Q96M94 604 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 FAM110AQ9BQ89 295 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 LRRC1Q9BTT6 524 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 PPP1R3EQ9H7J1 279 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 KLHL1Q9NR64 748 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 AAR2Q9Y312 384 aaKnown RBP4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 ADAM18Q9Y3Q7 739 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 ZNF711Q9Y462 761 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 DGKBQ9Y6T7 804 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 SCINQ9Y6U3 715 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 KIF26BQ2KJY2 2108 aa4.33□□□□□ -1.72
CACNA1A-208ENST00000587451 PDS5AQ29RF7 1337 aaKnown RBP4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 LILRA5A6NI73 299 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 LRRC53A6NM62 1247 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 USP17L23D6RBM5 183 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 DVL1O14640 695 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 PRSS1P07477 247 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 GM2AP17900 193 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 S1PR1P21453 382 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 CDKN1AP38936 164 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 GLIPR1P48060 266 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 GNAQP50148 359 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 EFNA5P52803 228 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 DVL1P1P54792 670 aaPredicted RBP4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 FOXM1Q08050 763 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 GPATCH4Q5T3I0 446 aaKnown RBP4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 PLEKHA7Q6IQ23 1121 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 FBXO46Q6PJ61 603 aaPredicted RBP4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 CYP26C1Q6V0L0 522 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 FOXRED2Q8IWF2 684 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 BBS10Q8TAM1 723 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 GRAPLQ8TC17 118 aaPredicted RBP4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 APOPT1Q96IL0 206 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 TRMT61BQ9BVS5 477 aaKnown RBP4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 PLEKHA4Q9H4M7 779 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 FBRSL1Q9HCM7 1045 aaKnown RBP4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 FAM118AQ9NWS6 357 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 KCND2Q9NZV8 630 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 TAAR2Q9P1P5 351 aa4.32□□□□□ -1.72
CACNA1A-208ENST00000587451 HNRNPA1P09651 372 aaKnown RBP eCLIP4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 HLA-DOBP13765 273 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 MARK3P27448 753 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 GGT5P36269 586 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 PPM1FP49593 454 aaPredicted RBP4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 HOXA1P49639 335 aaPredicted RBP4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 NEXNQ0ZGT2 675 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 C6orf141Q5SZD1 244 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 TTI2Q6NXR4 508 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 FBXL22Q6P050 247 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 GFRALQ6UXV0 394 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 GSTA5Q7RTV2 222 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 SLC46A3Q7Z3Q1 461 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 DSG4Q86SJ6 1040 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 TMEM219Q86XT9 240 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 SLC20A1Q8WUM9 679 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 ABTB1Q969K4 478 aaPredicted RBP4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 SAAL1Q96ER3 474 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 WBP1Q96G27 269 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 SLC41A2Q96JW4 573 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 ZNF583Q96ND8 569 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 QRFPRQ96P65 431 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 PGLYRP2Q96PD5 576 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 MPHOSPH8Q99549 860 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 MTERF1Q99551 399 aaKnown RBP4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 TMEM30AQ9NV96 361 aa4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 RALYQ9UKM9 306 aaKnown RBP4.31□□□□□ -1.72
CACNA1A-208ENST00000587451 CYSRT1A8MQ03 144 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 WDR1O75083 606 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 XBP1P17861 261 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 CD53P19397 219 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 CNTFP26441 200 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 ABCD1P33897 745 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 DDIT3P35638 169 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 CSNK2A1P68400 391 aaPredicted RBP4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 GALNT2Q10471 571 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 GSTA3Q16772 222 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 C2orf68Q2NKX9 166 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 USP41Q3LFD5 358 aa4.3□□□□□ -1.72
CACNA1A-208ENST00000587451 FRG2Q64ET8 278 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms