RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FAM45AQ8TCE6 357 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 FRS2Q8WU20 508 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 KCTD4Q8WVF5 259 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 TCF12Q99081 682 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 ECT2Q9H8V3 914 aa19.83■□□□□ 0.77
TRIM47-204ENST00000587339 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.83■□□□□ 0.77
TRIM47-204ENST00000587339 RUVBL2Q9Y230 463 aaKnown RBP19.83■□□□□ 0.77
TRIM47-204ENST00000587339 MYO9BQ13459 2157 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 TTC34A8MYJ7 566 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 DNAJC6O75061 913 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 UGT2B4P06133 528 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 APOA4P06727 396 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 SRPRAP08240 638 aaKnown RBP19.82■□□□□ 0.76
TRIM47-204ENST00000587339 BST1Q10588 318 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 IFT88Q13099 833 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 ADAM15Q13444 863 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 PEX6Q13608 980 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 VITQ6UXI7 678 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 DEC1Q9P2X7 70 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 SZT2Q5T011 3432 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 WASH3PC4AMC7 463 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 KLHL2O95198 593 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 ZRANB3Q5FWF4 1079 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 C6orf89Q6UWU4 347 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 USP45Q70EL2 814 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 C10orf107Q8IVU9 208 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 GRIN3AQ8TCU5 1115 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 SCRN2Q96FV2 425 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 LYSMD1Q96S90 227 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 GPAMQ9HCL2 828 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 ARL2BPQ9Y2Y0 163 aa19.82■□□□□ 0.76
TRIM47-204ENST00000587339 A0A1W2PQ67 120 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 UBA6A0AVT1 1052 aaPredicted RBP19.81■□□□□ 0.76
TRIM47-204ENST00000587339 PFDN6O15212 129 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 NDUFS3O75489 264 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 CLDN7O95471 211 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 GLRBP48167 497 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 TTPAP49638 278 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 VASPP50552 380 aaPredicted RBP19.81■□□□□ 0.76
TRIM47-204ENST00000587339 ST8SIA6P61647 398 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 FCHO2Q0JRZ9 810 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 CDKN3Q16667 212 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 PTPRNQ16849 979 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 TSNAXIP1Q2TAA8 658 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 PSAPL1Q6NUJ1 521 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 ZNF549Q6P9A3 640 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 GDPD4Q6W3E5 623 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 ZCCHC23Q6ZST2 131 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 THOC1Q96FV9 657 aaKnown RBP19.81■□□□□ 0.76
TRIM47-204ENST00000587339 C19orf43Q9BQ61 176 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 HEPHQ9BQS7 1158 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 ZNF576Q9H609 170 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 HPS4Q9NQG7 708 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 ELOVL2Q9NXB9 296 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 CLEC1BQ9P126 229 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 KLHL14Q9P2G3 628 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 CPSF2Q9P2I0 782 aaKnown RBP19.81■□□□□ 0.76
TRIM47-204ENST00000587339 MID2Q9UJV3 735 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 PLA2G4CQ9UP65 541 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 VPS9D1Q9Y2B5 631 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 SLC30A1Q9Y6M5 507 aa19.81■□□□□ 0.76
TRIM47-204ENST00000587339 NPIPB15A6NHN6 443 aaPredicted RBP19.8■□□□□ 0.76
TRIM47-204ENST00000587339 A8MX80 341 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 IL1BP01584 269 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 TROVE2P10155 538 aaKnown RBP eCLIP19.8■□□□□ 0.76
TRIM47-204ENST00000587339 SLC6A11P48066 632 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 CDKN1CP49918 316 aaPredicted RBP19.8■□□□□ 0.76
TRIM47-204ENST00000587339 CDKN2DP55273 166 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 XIAPP98170 497 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 OVGP1Q12889 678 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 STX3Q13277 289 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 GAB4Q2WGN9 574 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 AARS2Q5JTZ9 985 aaKnown RBP19.8■□□□□ 0.76
TRIM47-204ENST00000587339 RNF187Q5TA31 235 aaPredicted RBP19.8■□□□□ 0.76
TRIM47-204ENST00000587339 CCDC91Q7Z6B0 441 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 PIANPQ8IYJ0 282 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 FSTL5Q8N475 847 aaPredicted RBP19.8■□□□□ 0.76
TRIM47-204ENST00000587339 SPATA6LQ8N4H0 392 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 NXNL1Q96CM4 212 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 SCYL1Q96KG9 808 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 PPIL1Q9Y3C6 166 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 POLR2LP62875 67 aaKnown RBP19.8■□□□□ 0.76
TRIM47-204ENST00000587339 MESP2Q0VG99 397 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 FAM83EQ2M2I3 478 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 GRAMD4Q6IC98 578 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 TPRG1Q6ZUI0 275 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 YAF2Q8IY57 180 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 RDH11Q8TC12 318 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 LPGAT1Q92604 370 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 C7orf26Q96N11 449 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 KLHL32Q96NJ5 620 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 MYADMQ96S97 322 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 PLCD4Q9BRC7 762 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 CCDC68Q9H2F9 335 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 FAM96AQ9H5X1 160 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 NPHS2Q9NP85 383 aa19.8■□□□□ 0.76
TRIM47-204ENST00000587339 XIRP2A4UGR9 3374 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 PRRT4C9JH25 899 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 G3V2L1 256 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 TK2O00142 265 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms