RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 CERS6Q6ZMG9 384 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 DPY19L3Q6ZPD9 716 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 TPRG1Q6ZUI0 275 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 TAS2R42Q7RTR8 314 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 LYSMD3Q7Z3D4 306 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 CPLX4Q7Z7G2 160 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 C12orf40Q86WS4 652 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 RALGPS2Q86X27 583 aaPredicted RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 AGGF1Q8N302 714 aaeCLIP6.19□□□□□ -1.42
LIG3-206ENST00000586058 ZNF513Q8N8E2 541 aaPredicted RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 C2CD4AQ8NCU7 369 aaPredicted RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 OR13C4Q8NGS5 318 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 HCAR2Q8TDS4 363 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 LRRC8CQ8TDW0 803 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 FGF14Q92915 247 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 HLA-CQ95604 372 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 HDAC10Q969S8 669 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 CENPTQ96BT3 561 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 RSPRY1Q96DX4 576 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 KLHL32Q96NJ5 620 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 FCRL3Q96P31 734 aaPredicted RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 TCF12Q99081 682 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 TRIM56Q9BRZ2 755 aaKnown RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 ZCCHC2Q9C0B9 1178 aaKnown RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 CDH19Q9H159 772 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 VPS11Q9H270 941 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 TTYH1Q9H313 450 aaPredicted RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 PRO3102Q9H379 93 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 SNX15Q9NRS6 342 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 MKS1Q9NXB0 559 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 KCTD5Q9NXV2 234 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 PSD3Q9NYI0 1048 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 EURLQ9NYK6 297 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 IL1RAPL1Q9NZN1 696 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 CDH22Q9UJ99 828 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 FBXO5Q9UKT4 447 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 SLC39A10Q9ULF5 831 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 ZFC3H1O60293 1989 aaKnown RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 PDE4DIPQ5VU43 2346 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 A0A096LPK6 155 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SRRM3A6NNA2 597 aaPredicted RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 CXorf49A8MYA2 514 aaPredicted RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 TTC34A8MYJ7 566 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SPECC1L-ADORA2AF8WAN1 911 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 H3BMM5 538 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 H7C0S8 307 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 PSMD11O00231 422 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 QSOX1O00391 747 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 TRAFD1O14545 582 aaPredicted RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 LCE2BO14633 110 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 MBTPS2O43462 519 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SIN3BO75182 1162 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 H2AFYO75367 372 aaKnown RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 GJB3O75712 270 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 FAM155BO75949 473 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SRP72O76094 671 aaKnown RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 PRAMEF1O95521 474 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 DNTTP04053 509 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 VIMP08670 466 aaKnown RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 ALPIP09923 528 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 CISD3P0C7P0 127 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 COL6A2P12110 1019 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ZNF7P17097 686 aaPredicted RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 TAC1P20366 129 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 DRD1P21728 446 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ITGB7P26010 798 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 AKT1P31749 480 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 CCNFP41002 786 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 OPRD1P41143 372 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 LEPRP48357 1165 aaKnown RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 PSMD8P48556 350 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 NEK3P51956 506 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 STC1P52823 247 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 GYS2P54840 703 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 RAB10P61026 200 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 GUCY1A3Q02108 690 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 DLX2Q07687 328 aaPredicted RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 CTBP1Q13363 440 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ZNF234Q14588 700 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 COL19A1Q14993 1142 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 CCDC85BQ15834 202 aaPredicted RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 DBN1Q16643 649 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 INSCQ1MX18 579 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 FAM83EQ2M2I3 478 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 GPR33Q49SQ1 333 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 FBXO43Q4G163 708 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 TNFAIP8L3Q5GJ75 292 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 DGKKQ5KSL6 1271 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 AGAP9Q5VTM2 703 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ATG16L1Q676U5 607 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 FSTL4Q6MZW2 842 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 LVRNQ6Q4G3 990 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 TIFABQ6ZNK6 161 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 SNX20Q7Z614 316 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 TTC7BQ86TV6 843 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 ZC3HC1Q86WB0 502 aaKnown RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 CILP2Q8IUL8 1156 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 RAVER1Q8IY67 606 aaKnown RBP6.18□□□□□ -1.42
LIG3-206ENST00000586058 UNC5BQ8IZJ1 945 aa6.18□□□□□ -1.42
LIG3-206ENST00000586058 RBFAQ8N0V3 343 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms