RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CCDC172P0C7W6 258 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 FERP16591 822 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 TNFAIP3P21580 790 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 MIPP30301 263 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 ETV3P41162 512 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 POLD2P49005 469 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 ZNF135P52742 658 aaPredicted RBP14.45□□□□□ -0.1
SDF2-202ENST00000585428 CDK3Q00526 305 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 CTBSQ01459 385 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 DPTQ07507 201 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 ILF3Q12906 894 aaKnown RBP eCLIP14.45□□□□□ -0.1
SDF2-202ENST00000585428 TRA2AQ13595 282 aaKnown RBP eCLIP14.45□□□□□ -0.1
SDF2-202ENST00000585428 MAP9Q49MG5 647 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 CLEC17AQ6ZS10 378 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 HSD11B1LQ7Z5J1 315 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 TECPR1Q7Z6L1 1165 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 HEATR4Q86WZ0 1026 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 PGBD5Q8N414 524 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 OR4D9Q8NGE8 314 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 FNIP1Q8TF40 1166 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 DTD2Q96FN9 168 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 SCRN2Q96FV2 425 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 NUDCD1Q96RS6 583 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 TRIM7Q9C029 511 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 TRIM4Q9C037 500 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 CDH19Q9H159 772 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 SLC25A18Q9H1K4 315 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 HSD3B7Q9H2F3 369 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 NOD2Q9HC29 1040 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 LMBRD1Q9NUN5 540 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 PDP2Q9P2J9 529 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 PHTF1Q9UMS5 762 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 SUFUQ9UMX1 484 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 BSNQ9UPA5 3926 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 COL12A1Q99715 3063 aa14.45□□□□□ -0.1
SDF2-202ENST00000585428 UNC13CQ8NB66 2214 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 PSMD11O00231 422 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 MAFKO60675 156 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 RNF8O76064 485 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 IVLP07476 585 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 ATP1A3P13637 1013 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 LHCGRP22888 699 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 VIPR1P32241 457 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 ADCY8P40145 1251 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 PTPRRQ15256 657 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 PPP6R3Q5H9R7 873 aaPredicted RBP14.44□□□□□ -0.1
SDF2-202ENST00000585428 TMCO4Q5TGY1 634 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 NKAIN2Q5VXU1 208 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 PPP1R2P3Q6NXS1 205 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 Q6ZVL8 140 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 PATE1Q8WXA2 126 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 JPH3Q8WXH2 748 aaPredicted RBP14.44□□□□□ -0.1
SDF2-202ENST00000585428 CCDC74BQ96LY2 380 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 SPRY4Q9C004 299 aa14.44□□□□□ -0.1
SDF2-202ENST00000585428 SCN8AQ9UQD0 1980 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 IGHV1OR21-1A0A087WYE8 117 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 NPIPB15A6NHN6 443 aaPredicted RBP14.43□□□□□ -0.1
SDF2-202ENST00000585428 TMCO5BA8MYB1 307 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 PRPSAP2O60256 369 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 LRCH4O75427 683 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 PYGBP11216 843 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 GZMAP12544 262 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 UGT1A3P35503 534 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 HSPA9P38646 679 aaKnown RBP14.43□□□□□ -0.1
SDF2-202ENST00000585428 GNPDA1P46926 289 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 PEX6Q13608 980 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 NCAPHQ15003 741 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 SLC30A9Q6PML9 568 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 NLRP8Q86W28 1048 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 PAF1Q8N7H5 531 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 AGBL5Q8NDL9 886 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 ANKRD20A12PQ8NF67 263 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 PMEPA1Q969W9 287 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 MCCC1Q96RQ3 725 aaPredicted RBP14.43□□□□□ -0.1
SDF2-202ENST00000585428 DPYSL5Q9BPU6 564 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 MGME1Q9BQP7 344 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 DDA1Q9BW61 102 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 ADNPQ9H2P0 1102 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 ETNK2Q9NVF9 386 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 MYO6Q9UM54 1294 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 PLEKHM1Q9Y4G2 1056 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 B3GALT1Q9Y5Z6 326 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 AHCTF1Q8WYP5 2266 aa14.43□□□□□ -0.1
SDF2-202ENST00000585428 ATMINO43313 823 aaPredicted RBP14.42□□□□□ -0.1
SDF2-202ENST00000585428 PPFIA2O75334 1257 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 SOD1P00441 154 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 CPP00450 1065 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 FTLP02792 175 aaPredicted RBP14.42□□□□□ -0.1
SDF2-202ENST00000585428 CYP2A6P11509 494 aaPredicted RBP14.42□□□□□ -0.1
SDF2-202ENST00000585428 CDK11BP21127 795 aaKnown RBP14.42□□□□□ -0.1
SDF2-202ENST00000585428 AMPD1P23109 780 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 IL1R2P27930 398 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 PCK1P35558 622 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 PTSQ03393 145 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 SRSF1Q07955 248 aaKnown RBP eCLIP14.42□□□□□ -0.1
SDF2-202ENST00000585428 TRAF2Q12933 501 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 RALGPS1Q5JS13 557 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 DENND2CQ68D51 928 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 TMEM71Q6P5X7 295 aa14.42□□□□□ -0.1
SDF2-202ENST00000585428 RFLNAQ6ZTI6 216 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms