RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 EDEM2Q9BV94 578 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 EIF2B3Q9NR50 452 aaKnown RBP13.86□□□□□ -0.19
TRAF4-215ENST00000584944 SLC6A14Q9UN76 642 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 PPIL1Q9Y3C6 166 aa13.86□□□□□ -0.19
TRAF4-215ENST00000584944 CEP295Q9C0D2 2601 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 LNP1A1A4G5 178 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 CTAGE15A4D2H0 777 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 ESPNB1AK53 854 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 PDE2AO00408 941 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-215ENST00000584944 FANCGO15287 622 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 STX7O15400 261 aaKnown RBP13.85□□□□□ -0.19
TRAF4-215ENST00000584944 SPINT1O43278 529 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 PYGLP06737 847 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 CTAGE8P0CG41 777 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 HTR1BP28222 390 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 ETV3P41162 512 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 C2orf54Q08AI8 447 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 OVGP1Q12889 678 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 RALGDSQ12967 914 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 PTK2BQ14289 1009 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 IHHQ14623 411 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 ZDHHC20Q5W0Z9 365 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 RAET1GQ6H3X3 334 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 IL27RAQ6UWB1 636 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 RANBP10Q6VN20 620 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 CTAGE6Q86UF2 777 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 CTAGE4Q8IX94 777 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 GLIS1Q8NBF1 620 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 VOPP1Q96AW1 172 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 AP2M1Q96CW1 435 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 LENG8Q96PV6 779 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-215ENST00000584944 LYSMD1Q96S90 227 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 GTPBP2Q9BX10 602 aaKnown RBP13.85□□□□□ -0.19
TRAF4-215ENST00000584944 CDH19Q9H159 772 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 UTP11Q9Y3A2 253 aaKnown RBP13.85□□□□□ -0.19
TRAF4-215ENST00000584944 ZFHX4Q86UP3 3567 aa13.85□□□□□ -0.19
TRAF4-215ENST00000584944 PLXND1Q9Y4D7 1925 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 RGSL1A5PLK6 1076 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 C4orf47A7E2U8 309 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 CACNB4O00305 520 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-215ENST00000584944 PPFIA2O75334 1257 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 ATXN1LP0C7T5 689 aaKnown RBP13.84□□□□□ -0.19
TRAF4-215ENST00000584944 THEGLP0DJG4 465 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 LPOP22079 712 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-215ENST00000584944 LHCGRP22888 699 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 ADRA1AP35348 466 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 GPR1P46091 355 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 RABIFP47224 123 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 STC1P52823 247 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 CLDN2P57739 230 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 CALCOCO2Q13137 446 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 PTK6Q13882 451 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 POU6F1Q14863 301 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 PTPRRQ15256 657 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 IRF4Q15306 451 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 TAF1AQ15573 450 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-215ENST00000584944 C8orf74Q6P047 294 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 CASC4Q6P4E1 433 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 Q6ZVL8 140 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 HSD11B1LQ7Z5J1 315 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 IQCHQ86VS3 1027 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 JAMLQ86YT9 394 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 DCP2Q8IU60 420 aaKnown RBP13.84□□□□□ -0.19
TRAF4-215ENST00000584944 PPIL6Q8IXY8 311 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 NRSN1Q8IZ57 195 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 CEP112Q8N8E3 955 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 MFSD2AQ8NA29 543 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 PPHLN1Q8NEY8 458 aaKnown RBP13.84□□□□□ -0.19
TRAF4-215ENST00000584944 OR52K1Q8NGK4 314 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 SLCO2A1Q92959 643 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 DTD2Q96FN9 168 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 SPATA16Q9BXB7 569 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 TRIM31Q9BZY9 425 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 ZDHHC5Q9C0B5 715 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 RAB17Q9H0T7 212 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 FAM83DQ9H4H8 585 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 WDR26Q9H7D7 661 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 GDF3Q9NR23 364 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 TMEM74BQ9NUR3 256 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAF4-215ENST00000584944 BFARQ9NZS9 450 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 SAMD15Q9P1V8 674 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 CD84Q9UIB8 345 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 HS3ST3A1Q9Y663 406 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 CFAP47Q6ZTR5 3102 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 ANKRD36A6QL64 1941 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 PI4KAP42356 2102 aa13.84□□□□□ -0.19
TRAF4-215ENST00000584944 ASCC3Q8N3C0 2202 aaKnown RBP13.83□□□□□ -0.2
TRAF4-215ENST00000584944 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-215ENST00000584944 FAM187AA6NFU0 413 aa13.83□□□□□ -0.2
TRAF4-215ENST00000584944 EFCAB8A8MWE9 144 aa13.83□□□□□ -0.2
TRAF4-215ENST00000584944 TLR4O00206 839 aa13.83□□□□□ -0.2
TRAF4-215ENST00000584944 TOR1BO14657 336 aa13.83□□□□□ -0.2
TRAF4-215ENST00000584944 TTI1O43156 1089 aa13.83□□□□□ -0.2
TRAF4-215ENST00000584944 TSHRP16473 764 aa13.83□□□□□ -0.2
TRAF4-215ENST00000584944 TPH1P17752 444 aa13.83□□□□□ -0.2
TRAF4-215ENST00000584944 KELP23276 732 aa13.83□□□□□ -0.2
TRAF4-215ENST00000584944 SESN2P58004 480 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-215ENST00000584944 PTSQ03393 145 aa13.83□□□□□ -0.2
TRAF4-215ENST00000584944 MTM1Q13496 603 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms