RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	TLE3	Q04726	772 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	AP1B1	Q10567	949 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	TFDP2	Q14188	446 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	PRKD1	Q15139	912 aa	Predicted RBP	13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	HS1BP3	Q53T59	392 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	TFDP3	Q5H9I0	405 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	LRRC66	Q68CR7	880 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	DAAM2	Q86T65	1068 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	EXD1	Q8NHP7	514 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	LMX1A	Q8TE12	382 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	PDXP	Q96GD0	296 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	CALR3	Q96L12	384 aa	Known RBP	13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	WDR92	Q96MX6	357 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	CEP41	Q9BYV8	373 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	SLC13A1	Q9BZW2	595 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	CLPB	Q9H078	707 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	BRD8	Q9H0E9	1235 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	SAE1	Q9UBE0	346 aa	Predicted RBP	13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	CHKB	Q9Y259	395 aa		13.31	□□□□□ -0.28
SREBF1-223	ENST00000584760	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760		A0A0U1RQS6	177 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	TMEM202	A6NGA9	273 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	LMO7DN	F2Z398	122 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760		J3QKU1	62 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.3	□□□□□ -0.28	4e-7	■□□□□ 8.3
SREBF1-223	ENST00000584760	CELA2B	P08218	269 aa	Predicted RBP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	HOXC4	P09017	264 aa	Predicted RBP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	MYF5	P13349	255 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	TSHR	P16473	764 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	TGM2	P21980	687 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	CA4	P22748	312 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	ACTN2	P35609	894 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	ETV3	P41162	512 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	CD86	P42081	329 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	BLK	P51451	505 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	RPL26	P61254	145 aa	Known RBP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	SKOR1	P84550	965 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	DAB2	P98082	770 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	ARHGEF7	Q14155	803 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	LLGL1	Q15334	1064 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	PPP2R5E	Q16537	467 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	DEFB133	Q30KQ1	61 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	TAF1B	Q53T94	588 aa	Predicted RBP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	FAM182A	Q5T1J6	154 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	FAXC	Q5TGI0	409 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	KAZN	Q674X7	775 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	DENND2C	Q68D51	928 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	PNCK	Q6P2M8	343 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	PCSK4	Q6UW60	755 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	ENPP7	Q6UWV6	458 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	RFLNA	Q6ZTI6	216 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760		Q6ZVL8	140 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	B4GALNT4	Q76KP1	1039 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	TECPR1	Q7Z6L1	1165 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	HID1	Q8IV36	788 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	SPACA3	Q8IXA5	215 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	RCOR2	Q8IZ40	523 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	LRRC57	Q8N9N7	239 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	ATL2	Q8NHH9	583 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	OR1E3	Q8WZA6	343 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	TSACC	Q96A04	125 aa	Predicted RBP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	TADA1	Q96BN2	335 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	IMP4	Q96G21	291 aa	Known RBP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	NAF1	Q96HR8	494 aa	Known RBP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	AGAP3	Q96P47	875 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	LYSMD1	Q96S90	227 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	BOC	Q9BWV1	1114 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	LGR4	Q9BXB1	951 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	WDR26	Q9H7D7	661 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	USP29	Q9HBJ7	922 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	PCDH9	Q9HC56	1237 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	FGF22	Q9HCT0	170 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	KCTD5	Q9NXV2	234 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	KL	Q9UEF7	1012 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	RPL26L1	Q9UNX3	145 aa	Known RBP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	CLCA2	Q9UQC9	943 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	DGKB	Q9Y6T7	804 aa		13.3	□□□□□ -0.28
SREBF1-223	ENST00000584760	GRID2IP	A4D2P6	1211 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	CACNB4	O00305	520 aa	Predicted RBP	13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	RASGRP1	O95267	797 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	SOD1	P00441	154 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	MYCLP1	P12525	358 aa	Predicted RBP	13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	ZNF30	P17039	623 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	TEAD1	P28347	426 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	STC1	P52823	247 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	EPHB1	P54762	984 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	SRP54	P61011	504 aa	Known RBP	13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	C1orf61	Q13536	156 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	C6orf132	Q5T0Z8	1188 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	CRTC1	Q6UUV9	634 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	HEATR4	Q86WZ0	1026 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	NDUFAF2	Q8N183	169 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	FSTL5	Q8N475	847 aa	Predicted RBP	13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	SPC24	Q8NBT2	197 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	LPCAT1	Q8NF37	534 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	OR56A4	Q8NGH8	313 aa		13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	RBM41	Q96IZ5	413 aa	Known RBP	13.29	□□□□□ -0.28
SREBF1-223	ENST00000584760	TRIB3	Q96RU7	358 aa		13.29	□□□□□ -0.28

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