RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ZNF195O14628 629 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 PIGNO95427 931 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 CYBBP04839 570 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 ENO1P06733 434 aaKnown RBP22.65■■□□□ 1.22
CCDC47-204ENST00000582252 MNAT1P51948 309 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 PGGT1BP53609 377 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 SEL1L3Q68CR1 1132 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 MAVSQ7Z434 540 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 LDB1Q86U70 411 aaPredicted RBP22.65■■□□□ 1.22
CCDC47-204ENST00000582252 AFAP1L2Q8N4X5 818 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 LEMD2Q8NC56 503 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 MCUR1Q96AQ8 359 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 ALG14Q96F25 216 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 CNDP1Q96KN2 507 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 CORO1BQ9BR76 489 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 DNMT3BQ9UBC3 853 aaKnown RBP22.65■■□□□ 1.22
CCDC47-204ENST00000582252 CRYL1Q9Y2S2 319 aa22.65■■□□□ 1.22
CCDC47-204ENST00000582252 CXorf51AA0A1B0GTR3 108 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.64■■□□□ 1.21
CCDC47-204ENST00000582252 HDAC3O15379 428 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 WISP3O95389 354 aaPredicted RBP22.64■■□□□ 1.21
CCDC47-204ENST00000582252 DDX6P26196 483 aaKnown RBP eCLIP22.64■■□□□ 1.21
CCDC47-204ENST00000582252 NRIP1P48552 1158 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 SUOXP51687 545 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 EPHA5P54756 1037 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 EPHB1P54762 984 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 ZXDBP98169 803 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 TRAF2Q12933 501 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 ARL13AQ5H913 290 aaPredicted RBP22.64■■□□□ 1.21
CCDC47-204ENST00000582252 ATG14Q6ZNE5 492 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 TMPRSS6Q8IU80 811 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 TEX9Q8N6V9 391 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 MDGA1Q8NFP4 955 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 AARSD1Q9BTE6 412 aaKnown RBP22.64■■□□□ 1.21
CCDC47-204ENST00000582252 MMADHCQ9H3L0 296 aaPredicted RBP22.64■■□□□ 1.21
CCDC47-204ENST00000582252 POMKQ9H5K3 350 aa22.64■■□□□ 1.21
CCDC47-204ENST00000582252 SCAMP3O14828 347 aaKnown RBP22.63■■□□□ 1.21
CCDC47-204ENST00000582252 STX7O15400 261 aaKnown RBP22.63■■□□□ 1.21
CCDC47-204ENST00000582252 NDUFS3O75489 264 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 PDHA1P08559 390 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 PTPN2P17706 415 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 CDKN2DP55273 166 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 USP4Q13107 963 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 PTPRCAPQ14761 206 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 AARS2Q5JTZ9 985 aaKnown RBP22.63■■□□□ 1.21
CCDC47-204ENST00000582252 WASHC2DQ5SRD0 308 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 SPATA6LQ8N4H0 392 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 TTC16Q8NEE8 873 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 NSMCE3Q96MG7 304 aa22.63■■□□□ 1.21
CCDC47-204ENST00000582252 EML4Q9HC35 981 aaKnown RBP22.63■■□□□ 1.21
CCDC47-204ENST00000582252 A0A1W2PPC1 479 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 A0A1W2PRU2 124 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 MATN2O00339 956 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 PENKP01210 267 aaPredicted RBP22.62■■□□□ 1.21
CCDC47-204ENST00000582252 SLC4A1P02730 911 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 CSNK1DP48730 415 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 PDAP1Q13442 181 aaKnown RBP22.62■■□□□ 1.21
CCDC47-204ENST00000582252 DNAL1Q4LDG9 190 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 TREML1Q86YW5 311 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 CCNYL1Q8N7R7 359 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 SYTL2Q9HCH5 934 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 ARHGAP26Q9UNA1 814 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 FCF1Q9Y324 198 aaKnown RBP22.62■■□□□ 1.21
CCDC47-204ENST00000582252 PRRC2BQ5JSZ5 2229 aaKnown RBP22.62■■□□□ 1.21
CCDC47-204ENST00000582252 PRR5-ARHGAP8B1AHC4 643 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 LEFTY2O00292 366 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 GSC2O15499 205 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 IPO13O94829 963 aaKnown RBP22.62■■□□□ 1.21
CCDC47-204ENST00000582252 CHRNGP07510 517 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 MPSTP25325 297 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 TTPAP49638 278 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 RPL26P61254 145 aaKnown RBP22.62■■□□□ 1.21
CCDC47-204ENST00000582252 ARHGAP8P85298 464 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 ARMC12Q5T9G4 340 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 ACAD11Q709F0 780 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 BBS7Q8IWZ6 715 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 EFHBQ8N7U6 833 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 TXNDC5Q8NBS9 432 aaKnown RBP22.62■■□□□ 1.21
CCDC47-204ENST00000582252 FIBINQ8TAL6 211 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 FAR2Q96K12 515 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 CADM1Q9BY67 442 aaKnown RBP22.62■■□□□ 1.21
CCDC47-204ENST00000582252 TAS2R1Q9NYW7 299 aa22.62■■□□□ 1.21
CCDC47-204ENST00000582252 C2orf16Q68DN1 1984 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 UBA6A0AVT1 1052 aaPredicted RBP22.61■■□□□ 1.21
CCDC47-204ENST00000582252 B2RBV5 119 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 H7C0S8 307 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 RFXAPO00287 272 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 SMIM24O75264 130 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 TFEBP19484 476 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 CCND1P24385 295 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 SEMA3AQ14563 771 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 GPR158Q5T848 1215 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 ZNF549Q6P9A3 640 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 RINLQ6ZS11 566 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 TRIM67Q6ZTA4 783 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 FAM13CQ8NE31 585 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 WFDC5Q8TCV5 224 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 CMTM5Q96DZ9 223 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 MYO19Q96H55 970 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 MIPEPQ99797 713 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms