RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 BUD23O43709 281 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 POP4O95707 220 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 ATP5BP06576 529 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 PYGLP06737 847 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 RBP1P09455 135 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 RALBP11234 206 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 AOC1P19801 751 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 CR2P20023 1033 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 OGNP20774 298 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 XPAP23025 273 aaPredicted RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 CD70P32970 193 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 ETV4P43268 484 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 RGRP47804 291 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 LEPRP48357 1165 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 ARFIP2P53365 341 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 POLR2LP62875 67 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 ZXDBP98169 803 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 ECT2LQ008S8 904 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 PDAP1Q13442 181 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 MLF2Q15773 248 aaPredicted RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 SLC44A4Q53GD3 710 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 ZRANB3Q5FWF4 1079 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 FAM78AQ5JUQ0 283 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 HECTD2Q5U5R9 776 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 RNF43Q68DV7 783 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 TANGO2Q6ICL3 276 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 CNSTQ6PJW8 725 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 OTOAQ7RTW8 1153 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 TMEM25Q86YD3 366 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 CILP2Q8IUL8 1156 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 WDR75Q8IWA0 830 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 MFSD6LQ8IWD5 586 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 AHI1Q8N157 1196 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 PCDH20Q8N6Y1 951 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 NAT16Q8N8M0 369 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 OR4K2Q8NGD2 314 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 GPR150Q8NGU9 434 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 WFDC5Q8TCV5 224 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 ZNF398Q8TD17 642 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 CSGALNACT1Q8TDX6 532 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 ISL2Q96A47 359 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 ISG20Q96AZ6 181 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 CDKN2AIPNLQ96HQ2 116 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 TUBGCP5Q96RT8 1024 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 TRIB3Q96RU7 358 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 TCF12Q99081 682 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 TBC1D17Q9HA65 648 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 TRPV4Q9HBA0 871 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 MAGEE1Q9HCI5 957 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 GPAMQ9HCL2 828 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 OBP2AQ9NY56 170 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 TMEM216Q9P0N5 145 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 HECAQ9UBI9 543 aaPredicted RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 CCL26Q9Y258 94 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 FNDC3AQ9Y2H6 1198 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 VWA7Q9Y334 891 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 SIT1Q9Y3P8 196 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 KCTD3Q9Y597 815 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 OR51B4Q9Y5P0 310 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 SPTBN5Q9NRC6 3674 aaKnown RBP9.29□□□□□ -0.92
SS18-220ENST00000582092 TICRRQ7Z2Z1 1910 aa9.29□□□□□ -0.92
SS18-220ENST00000582092 A0A0G2JND7 137 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 K7ERQ8 282 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 GFRA2O00451 464 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 MAN2B1O00754 1011 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 GALR2O43603 387 aaPredicted RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 TRIM13O60858 407 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 SOCS5O75159 536 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 GJB3O75712 270 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 SRP72O76094 671 aaKnown RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 KLHL2O95198 593 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 PGLSO95336 258 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 TGDSO95455 350 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 NFATC1O95644 943 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 HSPA4LO95757 839 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 GSRP00390 522 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 MT-CO1P00395 513 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 PDGFBP01127 241 aaPredicted RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 PROCP04070 461 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 ASLP04424 464 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 SERPINE1P05121 402 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 PRKCGP05129 697 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 LTA4HP09960 611 aaKnown RBP9.28□□□□□ -0.92
SS18-220ENST00000582092 TCF3P15923 654 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 CTPS1P17812 591 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 KCNA4P22459 653 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 WEE1P30291 646 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 GDI1P31150 447 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 SLC8A1P32418 973 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 MAGEA9P43362 315 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 SLC1A6P48664 564 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 TTPAP49638 278 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 STARD6P59095 220 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 BST1Q10588 318 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 OVGP1Q12889 678 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 TRAF2Q12933 501 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 MYLK3Q32MK0 819 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 CARD16Q5EG05 197 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 LY6G5CQ5SRR4 150 aa9.28□□□□□ -0.92
SS18-220ENST00000582092 MBLAC2Q68D91 279 aa9.28□□□□□ -0.92
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