RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MMEL1Q495T6 779 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 PPP6R3Q5H9R7 873 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 ZNF766Q5HY98 468 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 TMEM81Q6P7N7 255 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 SUSD1Q6UWL2 747 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 GFRALQ6UXV0 394 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 CYP26C1Q6V0L0 522 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 B3GNT6Q6ZMB0 384 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 TMEM219Q86XT9 240 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 TMTC1Q8IUR5 882 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 KLHDC9Q8NEP7 349 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 DMBX1Q8NFW5 382 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 BBS4Q96RK4 519 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 DDX4Q9NQI0 724 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 SMYD2Q9NRG4 433 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 RRN3Q9NYV6 651 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 NFE2L3Q9Y4A8 694 aa3.29□□□□□ -1.88
SMCHD1-206ENST00000581631 SMCHD1A6NHR9 2005 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 IFNL4K9M1U5 179 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 CAPN9O14815 690 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 PLRG1O43660 514 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 TUBBP07437 444 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 HNRNPA1P09651 372 aaKnown RBP eCLIP3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 IFIT1P09914 478 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 ETFAP13804 333 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 PAX1P15863 534 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 CHATP28329 748 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 HNRNPH1P31943 449 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 CCT5P48643 541 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 TUBB4BP68371 445 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 BIRC3Q13489 604 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 NEDD9Q14511 834 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 KRTAP13-3Q3SY46 172 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 CCNI2Q6ZMN8 369 aaPredicted RBP3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 TDRPQ86YL5 185 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 DHX40Q8IX18 779 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 ODF3L1Q8IXM7 274 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 KCNH5Q8NCM2 988 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 C11orf65Q8NCR3 313 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 NOC3LQ8WTT2 800 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 ZBTB10Q96DT7 871 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 ZNF570Q96NI8 536 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 MPHOSPH8Q99549 860 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 MOV10L1Q9BXT6 1211 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 PLEKHA5Q9HAU0 1116 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 C20orf141Q9NUB4 165 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 BEX4Q9NWD9 120 aaPredicted RBP3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 HCFC1R1Q9NWW0 138 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 GGA3Q9NZ52 723 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 LUZP4Q9P127 313 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 HSPB7Q9UBY9 170 aa3.28□□□□□ -1.88
SMCHD1-206ENST00000581631 TEX13CA0A0J9YWL9 993 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 RRN3P2A6NIE6 340 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 TNPO2O14787 897 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 HEXAP06865 529 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 G6PDP11413 515 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 GPTP24298 496 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 STX2P32856 288 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 MAPK9P45984 424 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 PPM1FP49593 454 aaPredicted RBP3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 RPP30P78346 268 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 GALNT2Q10471 571 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 DHX8Q14562 1220 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 PPP2R5BQ15173 497 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 ZNF876PQ49A33 203 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 WDR73Q6P4I2 378 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 FBXO46Q6PJ61 603 aaPredicted RBP3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 LCTLQ6UWM7 567 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 CHERPQ8IWX8 916 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 SLC35F3Q8IY50 421 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 SPAG16Q8N0X2 631 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 LYG1Q8N1E2 194 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 ZCCHC9Q8N567 271 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 SCCPDHQ8NBX0 429 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 ADAD2Q8NCV1 583 aaKnown RBP3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 CADM4Q8NFZ8 388 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 FBXL8Q96CD0 374 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 ATOH8Q96SQ7 321 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 MAGEE1Q9HCI5 957 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 HCN3Q9P1Z3 774 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 FAM96BQ9Y3D0 163 aa3.27□□□□□ -1.89
SMCHD1-206ENST00000581631 PDS5AQ29RF7 1337 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 GAGE10A6NGK3 116 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 PRSS1P07477 247 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 CYC1P08574 325 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 CD58P19256 250 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 AGAP20933 346 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 ZNF10P21506 573 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 EIF2S3P41091 472 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 FMO5P49326 533 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 DSCR10P59022 87 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 UFM1P61960 85 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 TLE2Q04725 743 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 TRPC3Q13507 836 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 GPR68Q15743 365 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 TCTN1Q2MV58 587 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 SGO1Q5FBB7 561 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 ANKRD54Q6NXT1 300 aa3.26□□□□□ -1.89
SMCHD1-206ENST00000581631 CPLX2Q6PUV4 134 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms