RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 PDCD7Q8N8D1 485 aaKnown RBP15.53■□□□□ 0.08
SS18-216ENST00000580751 DENND6BQ8NEG7 585 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 LRRC39Q96DD0 335 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 PKNOX2Q96KN3 472 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 TBL1YQ9BQ87 522 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 KCTD5Q9NXV2 234 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 PIEZO1Q92508 2521 aa15.53■□□□□ 0.08
SS18-216ENST00000580751 GVINP1Q7Z2Y8 2422 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 C1orf232A0A0U1RR37 186 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 A0A1B0GTW7 788 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 A8MX80 341 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 PRR5-ARHGAP8B1AHC4 643 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 PRAMEF26H0Y7S4 382 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 BCAT2O15382 392 aaPredicted RBP15.52■□□□□ 0.08
SS18-216ENST00000580751 SLC31A1O15431 190 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 AGTP01019 485 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 MAOBP27338 520 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 CHRNA4P43681 627 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 ARL4CP56559 192 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 RACK1P63244 317 aaKnown RBP15.52■□□□□ 0.08
SS18-216ENST00000580751 AGERQ15109 404 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 LRRC66Q68CR7 880 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 CRTC1Q6UUV9 634 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 RANBP10Q6VN20 620 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 CENPUQ71F23 418 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 RAVER1Q8IY67 606 aaKnown RBP15.52■□□□□ 0.08
SS18-216ENST00000580751 SLC25A41Q8N5S1 370 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 CEP76Q8TAP6 659 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 SERAC1Q96JX3 654 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 ORAI3Q9BRQ5 295 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 ARRDC1-AS1Q9H2J1 176 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 TRABDQ9H4I3 376 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 MAGEE1Q9HCI5 957 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 HACD3Q9P035 362 aa15.52■□□□□ 0.08
SS18-216ENST00000580751 ZNF292O60281 2723 aa15.52■□□□□ 0.07
SS18-216ENST00000580751 E7ESA3 106 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 LRP3O75074 770 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 PAK4O96013 591 aaPredicted RBP15.51■□□□□ 0.07
SS18-216ENST00000580751 MYBL2P10244 700 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 TSHRP16473 764 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 AFF3P51826 1226 aaKnown RBP15.51■□□□□ 0.07
SS18-216ENST00000580751 FGL2Q14314 439 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 ACOX1Q15067 660 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 HIF1AQ16665 826 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 DUOXA1Q1HG43 343 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 DNAJC21Q5F1R6 531 aaKnown RBP15.51■□□□□ 0.07
SS18-216ENST00000580751 BEND6Q5SZJ8 279 aaPredicted RBP15.51■□□□□ 0.07
SS18-216ENST00000580751 LRRC8BQ6P9F7 803 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 TRMT10CQ7L0Y3 403 aaKnown RBP15.51■□□□□ 0.07
SS18-216ENST00000580751 TSPAN33Q86UF1 283 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 TMEM145Q8NBT3 493 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 C1orf216Q8TAB5 229 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 KLK6Q92876 244 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 SLC6A18Q96N87 628 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 LENG8Q96PV6 779 aaPredicted RBP15.51■□□□□ 0.07
SS18-216ENST00000580751 SMIM14Q96QK8 99 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 HINFPQ9BQA5 517 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 APOL2Q9BQE5 337 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 EBF2Q9HAK2 575 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 ZFYVE1Q9HBF4 777 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 ARNT2Q9HBZ2 717 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 TM9SF3Q9HD45 589 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 AASDHPPTQ9NRN7 309 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 TMEM74BQ9NUR3 256 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 ZNF711Q9Y462 761 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 CACNA1EQ15878 2313 aa15.51■□□□□ 0.07
SS18-216ENST00000580751 FAM186AA6NE01 2351 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 WNT9AO14904 365 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 ATP8B1O43520 1251 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 USP12O75317 370 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 RECQL5O94762 991 aaPredicted RBP15.5■□□□□ 0.07
SS18-216ENST00000580751 TMEM63AO94886 807 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 MAGEA3P43357 314 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 STC1P52823 247 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 SPARCL1Q14515 664 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 STAT4Q14765 748 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 LRRC14Q15048 493 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 PTPRRQ15256 657 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 TEAD4Q15561 434 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 CDKN3Q16667 212 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 DENND2CQ68D51 928 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 FBXO38Q6PIJ6 1188 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 CCNJLQ8IV13 435 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 FAM174AQ8TBP5 190 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 SKA1Q96BD8 255 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 NUS1Q96E22 293 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 COQ10AQ96MF6 247 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 TTC25Q96NG3 672 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 PHOX2BQ99453 314 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 NAT9Q9BTE0 207 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 TXLNGYQ9BZA5 131 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 GPR63Q9BZJ6 419 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 COQ6Q9Y2Z9 468 aa15.5■□□□□ 0.07
SS18-216ENST00000580751 PLXNA2O75051 1894 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 MAGEB16A2A368 324 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 RGSL1A5PLK6 1076 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 FPGTO14772 594 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 CLDN7O95471 211 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 CFIP05156 583 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 PIRTP0C851 137 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms