RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CEACAM5P06731 702 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 GLI1P08151 1106 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 ITGA3P26006 1051 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 MMP12P39900 470 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 FASLGP48023 281 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 RNASE9P60153 205 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 KRTAP10-9P60411 292 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 RPS18P62269 152 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 CTBSQ01459 385 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 ELP6Q0PNE2 266 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 RALGDSQ12967 914 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 MTA1Q13330 715 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 PDCLQ13371 301 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 IL10RAQ13651 578 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 CHRNA6Q15825 494 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 UGP2Q16851 508 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 UGT8Q16880 541 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 GDF7Q7Z4P5 450 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 DRC7Q8IY82 874 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 WDTC1Q8N5D0 677 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 FDCSPQ8NFU4 85 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 C1orf74Q96LT6 269 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 CPXM1Q96SM3 734 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 NPY6RQ99463 290 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 ING2Q9H160 280 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 ACTL8Q9H568 366 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 AKIRIN1Q9H9L7 192 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 ACSS2Q9NR19 701 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 ASNSD1Q9NWL6 643 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 TRNAU1APQ9NX07 287 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 MFHAS1Q9Y4C4 1052 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 PCDHGB7Q9Y5F8 929 aa7.66□□□□□ -1.18
SMARCE1-217ENST00000580654 TRBV23OR9-2A0A075B6M9 112 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 GOLGA6L3A6NEY3 463 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 HSF2BPO75031 334 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 SRGAP2O75044 1071 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 DAB1O75553 588 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 RECQL5O94762 991 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 EML2O95834 649 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 SYT1P21579 422 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 KELP23276 732 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 RPL13P26373 211 aaKnown RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 CASP14P31944 242 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 PTGIRP43119 386 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 GNPDA1P46926 289 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 SUOXP51687 545 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 NDST2P52849 883 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 SH3BP2P78314 561 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 CDK18Q07002 472 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 ILF3Q12906 894 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 BIRC2Q13490 618 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 RAPGEF1Q13905 1077 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 POLD3Q15054 466 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 RABEP1Q15276 862 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 DCAF17Q5H9S7 520 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 MIIPQ5JXC2 388 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 BRMS1LQ5PSV4 323 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 TCERG1LQ5VWI1 586 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 OLFML1Q6UWY5 402 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 LRRC31Q6UY01 552 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 ZNF517Q6ZMY9 492 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 FAM183BPQ6ZVS7 135 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 ARHGEF19Q8IW93 802 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 RHOT1Q8IXI2 618 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 ZNF295-AS1Q8N0V1 137 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 OR10G6Q8NH81 332 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 LMO3Q8TAP4 145 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 SLC37A2Q8TED4 501 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 THAP4Q8WY91 577 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 INPP5DQ92835 1189 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 SLC35C1Q96A29 364 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 STAMBPL1Q96FJ0 436 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 AHCYL2Q96HN2 611 aaKnown RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 USB1Q9BQ65 265 aaKnown RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 FRMD8Q9BZ67 464 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 TRIM8Q9BZR9 551 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 ZYG11BQ9C0D3 744 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 TTYH3Q9C0H2 523 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 WDCPQ9H6R7 721 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 ACP6Q9NPH0 428 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 LHX9Q9NQ69 397 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 FAM13BQ9NYF5 915 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 KLHL3Q9UH77 587 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 SUFUQ9UMX1 484 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 CNTN6Q9UQ52 1028 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 MTMR6Q9Y217 621 aa7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 DNMT3AQ9Y6K1 912 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-217ENST00000580654 ZNF469Q96JG9 3925 aaPredicted RBP7.65□□□□□ -1.19
SMARCE1-217ENST00000580654 TEX33O43247 280 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 TMCC1O94876 653 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 RHOBTB3O94955 611 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 NDUFA10O95299 355 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 TIAF1O95411 115 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 SNRPB2P08579 225 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 MYCLP1P12525 358 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 PTGER4P35408 488 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 ADCY8P40145 1251 aa7.64□□□□□ -1.19
SMARCE1-217ENST00000580654 GARSP41250 739 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms