RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CTPS1P17812 591 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GNAZP19086 355 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ARNTP27540 789 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SPRP35270 261 aaPredicted RBP12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ECT2LQ008S8 904 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 KDSRQ06136 332 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 NAB1Q13506 487 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DLG2Q15700 870 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GAB4Q2WGN9 574 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 LRRC73Q5JTD7 316 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PCID2Q5JVF3 399 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GRTP1Q5TC63 336 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FSTL4Q6MZW2 842 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 NCEH1Q6PIU2 408 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 KYAT3Q6YP21 454 aaKnown RBP12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ATG14Q6ZNE5 492 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 Q6ZVU0 165 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TREML1Q86YW5 311 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DTX3LQ8TDB6 740 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RAB3IPQ96QF0 476 aaPredicted RBP12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 KIFC1Q9BW19 673 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ARNT2Q9HBZ2 717 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SIRPGQ9P1W8 387 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TCAF1Q9Y4C2 921 aa12.71□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TTC34A8MYJ7 566 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FCHO1O14526 889 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 KLF11O14901 512 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CISD3P0C7P0 127 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SOX9P48436 509 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DGKGP49619 791 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ARSDP51689 593 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 POM121L1PQ3SYA9 428 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 LDB1Q86U70 411 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DENND6AQ8IWF6 608 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CHST14Q8NCH0 376 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ACMSDQ8TDX5 336 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 WDR60Q8WVS4 1066 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 VOPP1Q96AW1 172 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CLPTM1LQ96KA5 538 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RILPQ96NA2 401 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RBBP8Q99708 897 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SHCBP1LQ9BZQ2 653 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TMEM216Q9P0N5 145 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DCDC2Q9UHG0 476 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TGDSO95455 350 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ENO1P06733 434 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ALPIP09923 528 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PLK1P53350 603 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 AQP5P55064 265 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CTBP1Q13363 440 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 LRIT3Q3SXY7 679 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TEDDM1Q5T9Z0 273 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DPY19L3Q6ZPD9 716 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RAPH1Q70E73 1250 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 Q7L0L9 218 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ACVR1CQ8NER5 493 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 OR13C4Q8NGS5 318 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 OTUB2Q96DC9 234 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MSLNLQ96KJ4 702 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ANKRD27Q96NW4 1050 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ZMYM5Q9UJ78 669 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 EMCNQ9ULC0 261 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 DOCK8Q8NF50 2099 aa12.7□□□□□ -0.38
CDK5RAP3-217ENST00000580287 WASH3PC4AMC7 463 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 LDB2O43679 373 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ITM2AO43736 263 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PLIN3O60664 434 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PRSS56P0CW18 603 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PTPN4P29074 926 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 GDI1P31150 447 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RASSF2P50749 326 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ALDH18A1P54886 795 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 BIRC2Q13490 618 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ZSWIM9Q86XI8 627 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PAF1Q8N7H5 531 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 PPHLN1Q8NEY8 458 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MDGA1Q8NFP4 955 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 OR13J1Q8NGT2 312 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SKA1Q96BD8 255 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 CHFRQ96EP1 664 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FEM1CQ96JP0 617 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 C7orf26Q96N11 449 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SH3GL3Q99963 347 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 RNPEPL1Q9HAU8 725 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 FBRSL1Q9HCM7 1045 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 BPIFA1Q9NP55 256 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TAS2R1Q9NYW7 299 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MARK1Q9P0L2 795 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 HECAQ9UBI9 543 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SLC39A10Q9ULF5 831 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 HELZP42694 1942 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 MAGEB16A2A368 324 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 TTC36A6NLP5 189 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 BIRC5O15392 142 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 NDST3O95803 873 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 ADH1CP00326 375 aa12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 POLR2EP19388 210 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-217ENST00000580287 SERPINB8P50452 374 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms