RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CPSF3Q9UKF6 684 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 INTS6Q9UL03 887 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 PIN4Q9Y237 131 aaKnown RBP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.2□□□□□ -1.9
KPNB1-208ENST00000580019 CAPN7Q9Y6W3 813 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 A2ML1A8K2U0 1454 aa3.2□□□□□ -1.9
KPNB1-208ENST00000580019 CCDC195A0A1B0GUA6 201 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ANXA2P2A6NMY6 339 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TMEM110-MUSTN1A8MSY1 372 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 PRR5-ARHGAP8B1AHC4 643 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 AGPSO00116 658 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 SLC33A1O00400 549 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 MCF2LO15068 1137 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ADAMDEC1O15204 470 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TACC1O75410 805 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TADA2AO75478 443 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 BCAS2O75934 225 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 REC8O95072 547 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TRIM16O95361 564 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 PENKP01210 267 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ALDOAP04075 364 aaKnown RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 GALTP07902 379 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 PDHA1P08559 390 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 IRF1P10914 325 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 CYP4B1P13584 511 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ARSAP15289 507 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TRIM21P19474 475 aaKnown RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 CCNA2P20248 432 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 PPIFP30405 207 aaKnown RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 AVPR2P30518 371 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 SOAT1P35610 550 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 MATR3P43243 847 aaKnown RBP eCLIP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 MTNR1AP48039 350 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 KHKP50053 298 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 GNAQP50148 359 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 LUMP51884 338 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 GMFBP60983 142 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 YPEL5P62699 121 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 CEBPZQ03701 1054 aaKnown RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 IKQ13123 557 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 MTAPQ13126 283 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TMED1Q13445 227 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 GRAPQ13588 217 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 BYSLQ13895 437 aaKnown RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ZNF273Q14593 569 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 MYLK3Q32MK0 819 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ZNF260Q3ZCT1 412 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 FUT11Q495W5 492 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 CEP55Q53EZ4 464 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 IGSF11Q5DX21 431 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 SH2D4BQ5SQS7 431 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 UBAP2Q5T6F2 1119 aaKnown RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ARHGAP40Q5TG30 622 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 SFMBT2Q5VUG0 894 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 DAB2IPQ5VWQ8 1189 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 KRT79Q5XKE5 535 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ETFRF1Q6IPR1 90 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 RGS7BPQ6MZT1 257 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 EFCAB12Q6NXP0 572 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TAPT1Q6NXT6 567 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TMEM88Q6PEY1 159 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 DRICH1Q6PGQ1 229 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TSSK4Q6SA08 328 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 GBP6Q6ZN66 633 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 MIER3Q7Z3K6 550 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 SPATA19Q7Z5L4 167 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 ZER1Q7Z7L7 766 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 IQCHQ86VS3 1027 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 KLHL7Q8IXQ5 586 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 SIRT6Q8N6T7 355 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 PI4KAP1Q8N8J0 262 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 MRPL43Q8N983 215 aaKnown RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TC2NQ8N9U0 490 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 CNNM3Q8NE01 707 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TSPAN14Q8NG11 270 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 CCDC110Q8TBZ0 833 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 BICD2Q8TD16 824 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 BCAS4Q8TDM0 211 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 CTNNBL1Q8WYA6 563 aaPredicted RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 NPIPB3Q92617 1050 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TFAP2CQ92754 450 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 KCNJ9Q92806 393 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 VPS50Q96JG6 964 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 PRAM1Q96QH2 718 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 HAPLN3Q96S86 360 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 RUFY1Q96T51 708 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 PNKPQ96T60 521 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 GAD1Q99259 594 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 PAFAH2Q99487 392 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 TIMP4Q99727 224 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 SRSF8Q9BRL6 282 aaKnown RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 SYT17Q9BSW7 474 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 UTP14AQ9BVJ6 771 aaKnown RBP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 C1QTNF1Q9BXJ1 281 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.19□□□□□ -1.9
KPNB1-208ENST00000580019 HSD3B7Q9H2F3 369 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 HRH4Q9H3N8 390 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 KCTD5Q9NXV2 234 aa3.19□□□□□ -1.9
KPNB1-208ENST00000580019 GDE1Q9NZC3 331 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms