RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 RCOR3Q9P2K3 495 aaPredicted RBP13.83□□□□□ -0.2
CSNK1D-211ENST00000579316 LHX3Q9UBR4 397 aa13.83□□□□□ -0.2
CSNK1D-211ENST00000579316 DNAI1Q9UI46 699 aa13.83□□□□□ -0.2
CSNK1D-211ENST00000579316 ENTPD4Q9Y227 616 aa13.83□□□□□ -0.2
CSNK1D-211ENST00000579316 DIDO1Q9BTC0 2240 aaKnown RBP13.83□□□□□ -0.2
CSNK1D-211ENST00000579316 NAV3Q8IVL0 2385 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 TRIM49BA6NDI0 452 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 A8MU76 341 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 BECN2A8MW95 431 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 BIN1O00499 593 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 SNAP47Q5SQN1 464 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 AFMIDQ63HM1 303 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 ISM2Q6H9L7 571 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 JMJD6Q6NYC1 403 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 LIPIQ6XZB0 460 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 DNAAF5Q86Y56 855 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 AHCYL2Q96HN2 611 aaKnown RBP13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 CEP63Q96MT8 703 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 NCAPGQ9BPX3 1015 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 SLC25A23Q9BV35 468 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 TEX101Q9BY14 249 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 SYNCQ9H7C4 482 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 UBE2TQ9NPD8 197 aaPredicted RBP13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 PCDHGB7Q9Y5F8 929 aa13.82□□□□□ -0.2
CSNK1D-211ENST00000579316 MED13LQ71F56 2210 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 PIPSLA2A3N6 862 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 GOLGA6L3A6NEY3 463 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 LRCH4O75427 683 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 CBX6O95503 412 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 ANKRD34CP0C6C1 535 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 ELFN1P0C7U0 828 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 ZNF28P17035 718 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 FLT3P36888 993 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 ADCY8P40145 1251 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 GNPDA1P46926 289 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 RNASE9P60153 205 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 NAA30Q147X3 362 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 ZRANB3Q5FWF4 1079 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 SMYD5Q6GMV2 418 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 SLC47A2Q86VL8 602 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 FAM131BQ86XD5 332 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 GPT2Q8TD30 523 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 PTCD2Q8WV60 388 aaKnown RBP13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 SLC38A3Q99624 504 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 PHPT1Q9NRX4 125 aaPredicted RBP13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 OR12D3Q9UGF7 316 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 SUFUQ9UMX1 484 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 SLC17A4Q9Y2C5 497 aa13.81□□□□□ -0.2
CSNK1D-211ENST00000579316 TACC2O95359 2948 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 ABCA2Q9BZC7 2435 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 TEX33O43247 280 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 BUB1BO60566 1050 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 KATNA1O75449 491 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 MAP3K6O95382 1288 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 IVLP07476 585 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 ACTR1BP42025 376 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 NDST2P52849 883 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 ACTR1AP61163 376 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 DNASE1L3Q13609 305 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 CCDC40Q4G0X9 1142 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 CFAP58Q5T655 872 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 TRNP1Q6NT89 227 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 RWDD4Q6NW29 188 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 DPPA4Q7L190 304 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 ZNF761Q86XN6 746 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 HPS6Q86YV9 775 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 SFRP1Q8N474 314 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 NETO2Q8NC67 525 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 GALNT6Q8NCL4 622 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 SLC37A2Q8TED4 501 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 THAP4Q8WY91 577 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 SEC14L1Q92503 715 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 ECHDC3Q96DC8 303 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 SCARF2Q96GP6 870 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 EXOC2Q96KP1 924 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 TUBGCP5Q96RT8 1024 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 NOL6Q9H6R4 1146 aaKnown RBP13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 SUDS3Q9H7L9 328 aaPredicted RBP13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 PHTF1Q9UMS5 762 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 ZNF451Q9Y4E5 1061 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 SPG11Q96JI7 2443 aa13.8□□□□□ -0.2
CSNK1D-211ENST00000579316 C21orf140B9A014 251 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 CEACAM4O75871 244 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 LRIG2O94898 1065 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 NFKBIAP25963 317 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 TEAD1P28347 426 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 GARSP41250 739 aaKnown RBP13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 GABRB2P47870 512 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 PAK1Q13153 545 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 NR6A1Q15406 480 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 CYTH1Q15438 398 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 UGT8Q16880 541 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 CCDC183Q5T5S1 534 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 CPZQ66K79 652 aa13.79□□□□□ -0.2
CSNK1D-211ENST00000579316 KLHL10Q6JEL2 608 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms