RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 RGRP47804 291 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 KLK7P49862 253 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 ZNF143P52747 638 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 NDST2P52849 883 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 POLE2P56282 527 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 UBXN1Q04323 297 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 NKAIN2Q5VXU1 208 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 DCUN1D2Q6PH85 259 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 DPPA4Q7L190 304 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 FAM129CQ86XR2 697 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 CNGA4Q8IV77 575 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 CACNA2D3Q8IZS8 1091 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 C3orf20Q8ND61 904 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 AGBL5Q8NDL9 886 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 ZNF564Q8TBZ8 553 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 GPBAR1Q8TDU6 330 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 NUS1Q96E22 293 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 AHCYL2Q96HN2 611 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 MCEEQ96PE7 176 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PANX2Q96RD6 677 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PCDHB18PQ96TA0 734 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 B3GNT4Q9C0J1 378 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 SLC39A8Q9C0K1 460 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 SP110Q9HB58 689 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 ANKMY1Q9P2S6 941 aa12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 TLN1Q9Y490 2541 aaKnown RBP12.62□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PTPN13Q12923 2485 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 EEF2KO00418 725 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 MFAP3LO75121 409 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 MYCLP1P12525 358 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 UNGP13051 313 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 LIFP15018 202 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 FECHP22830 423 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 CD1CP29017 333 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 UGT1A3P35503 534 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 CSNK1DP48730 415 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 LIMK2P53671 638 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 AIF1P55008 147 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 RALGDSQ12967 914 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PTP4A2Q12974 167 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PEX6Q13608 980 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 UBAP2LQ14157 1087 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 IGFBP7Q16270 282 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 CLEC16AQ2KHT3 1053 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 FIGNQ5HY92 759 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 HEATR4Q86WZ0 1026 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PELI3Q8N2H9 469 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 TC2NQ8N9U0 490 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PATE1Q8WXA2 126 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 ERGIC2Q96RQ1 377 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 ASPSCR1Q9BZE9 553 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 GANQ9H2C0 597 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 DHX35Q9H5Z1 703 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 LRRC19Q9H756 370 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PDFQ9HBH1 243 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 ZNF71Q9NQZ8 489 aaPredicted RBP12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 GPATCH2LQ9NWQ4 482 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 KCNK4Q9NYG8 393 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 B3GALT1Q9Y5Z6 326 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 DOPEY2Q9Y3R5 2298 aa12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 ZFC3H1O60293 1989 aaKnown RBP12.61□□□□□ -0.39
CDK5RAP3-212ENST00000579175 SDK2Q58EX2 2172 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 TRBV23OR9-2A0A075B6M9 112 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 EFCAB7A8K855 629 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 ZNF891A8MT65 544 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 GYPCP04921 128 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PRKAR1AP10644 381 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 NOP2P46087 812 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 GPR3P46089 330 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 RENBPP51606 427 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 RPL7AP62424 266 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 CTBSQ01459 385 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 TRA2AQ13595 282 aaKnown RBP eCLIP12.6□□□□□ -0.391e-7■□□□□ 8.1
CDK5RAP3-212ENST00000579175 CLPPQ16740 277 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 SNAP47Q5SQN1 464 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 DCAF12Q5T6F0 453 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 AFMIDQ63HM1 303 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 RAET1GQ6H3X3 334 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 DOK6Q6PKX4 331 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 NRROSQ86YC3 692 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PHF13Q86YI8 300 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 OR4D9Q8NGE8 314 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PMEPA1Q969W9 287 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 KIAA1143Q96AT1 154 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 CNPY3Q9BT09 278 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 CDH19Q9H159 772 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 EPN3Q9H201 632 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 B4GALT6Q9UBX8 382 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 SUFUQ9UMX1 484 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 AP4E1Q9UPM8 1137 aa12.6□□□□□ -0.39
CDK5RAP3-212ENST00000579175 TTC24A2A3L6 582 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-212ENST00000579175 A8MU76 341 aa12.59□□□□□ -0.39
CDK5RAP3-212ENST00000579175 PPM1DO15297 605 aa12.59□□□□□ -0.39
CDK5RAP3-212ENST00000579175 RAD1O60671 282 aa12.59□□□□□ -0.39
CDK5RAP3-212ENST00000579175 NTRK1P04629 796 aa12.59□□□□□ -0.39
CDK5RAP3-212ENST00000579175 CEACAM5P06731 702 aa12.59□□□□□ -0.39
CDK5RAP3-212ENST00000579175 NFKBIAP25963 317 aa12.59□□□□□ -0.39
CDK5RAP3-212ENST00000579175 HTR7P34969 479 aa12.59□□□□□ -0.39
CDK5RAP3-212ENST00000579175 ACTR1BP42025 376 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms