RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 C1orf232A0A0U1RR37 186 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 C5orf60A6NFR6 353 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 H3BM21 787 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 ATXN1LP0C7T5 689 aaKnown RBP19.29■□□□□ 0.68
SS18-208ENST00000577751 ITPRIPL1Q6GPH6 555 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 ENPP7Q6UWV6 458 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 PHACTR4Q8IZ21 702 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 EID2BQ96D98 161 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 SPATA13Q96N96 652 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 LGR4Q9BXB1 951 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 TOR4AQ9NXH8 423 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 CSNK1G3Q9Y6M4 447 aa19.29■□□□□ 0.68
SS18-208ENST00000577751 RGSL1A5PLK6 1076 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 TMEM202A6NGA9 273 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 CACNB4O00305 520 aaPredicted RBP19.28■□□□□ 0.68
SS18-208ENST00000577751 SCAMP1O15126 338 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 TNFSF14O43557 240 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 ANXA9O76027 345 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 STK10O94804 968 aaKnown RBP19.28■□□□□ 0.68
SS18-208ENST00000577751 DKK1O94907 266 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 SOD1P00441 154 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 SPINT3P49223 89 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 HK3P52790 923 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 PPARDQ03181 441 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 ALG11Q2TAA5 492 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 CCDC70Q6NSX1 233 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 LYSMD3Q7Z3D4 306 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 TMC3Q7Z5M5 1100 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 ZNF548Q8NEK5 533 aaPredicted RBP19.28■□□□□ 0.68
SS18-208ENST00000577751 OR4C6Q8NH72 309 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 ATL2Q8NHH9 583 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 CCDC110Q8TBZ0 833 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 CCHCR1Q8TD31 782 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 SCAMP4Q969E2 229 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 AP2M1Q96CW1 435 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 WDR92Q96MX6 357 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 WDR24Q96S15 920 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 SRPK1Q96SB4 655 aaKnown RBP19.28■□□□□ 0.68
SS18-208ENST00000577751 FRMD8P1Q9BZ68 369 aaPredicted RBP19.28■□□□□ 0.68
SS18-208ENST00000577751 TCEAL2Q9H3H9 227 aaPredicted RBP19.28■□□□□ 0.68
SS18-208ENST00000577751 WDR26Q9H7D7 661 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 ZFYVE1Q9HBF4 777 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 FTSJ1Q9UET6 329 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 CD84Q9UIB8 345 aa19.28■□□□□ 0.68
SS18-208ENST00000577751 NEMP2A6NFY4 417 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 F5H423 210 aaPredicted RBP19.27■□□□□ 0.68
SS18-208ENST00000577751 TRIM38O00635 465 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 TNFRSF10CO14798 259 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 ZSCAN12O43309 604 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 AQP9O43315 295 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 FTH1P19P0C7X4 201 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 PMLP29590 882 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 BLKP51451 505 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 GEMP55040 296 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 GSE1Q14687 1217 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 SIRPB2Q5JXA9 342 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 NYAP1Q6ZVC0 841 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 SLCO6A1Q86UG4 719 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 HEATR4Q86WZ0 1026 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 KLHDC8BQ8IXV7 354 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 RBFAQ8N0V3 343 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 OR56A4Q8NGH8 313 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 TSACCQ96A04 125 aaPredicted RBP19.27■□□□□ 0.68
SS18-208ENST00000577751 TMEM121Q9BTD3 319 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 SPASTQ9UBP0 616 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 APOBEC3BQ9UH17 382 aaKnown RBP19.27■□□□□ 0.68
SS18-208ENST00000577751 WASF3Q9UPY6 502 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 DGKBQ9Y6T7 804 aa19.27■□□□□ 0.68
SS18-208ENST00000577751 PDE2AO00408 941 aaPredicted RBP19.26■□□□□ 0.67
SS18-208ENST00000577751 LIASO43766 372 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 GCATO75600 419 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 LDOC1O95751 146 aaPredicted RBP19.26■□□□□ 0.67
SS18-208ENST00000577751 PYGLP06737 847 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 PIRTP0C851 137 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 MYCLP1P12525 358 aaPredicted RBP19.26■□□□□ 0.67
SS18-208ENST00000577751 HLA-DPA1P20036 260 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 KELP23276 732 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 PSMB4P28070 264 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 CHRNA4P43681 627 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 SRP54P61011 504 aaKnown RBP19.26■□□□□ 0.67
SS18-208ENST00000577751 CDK3Q00526 305 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 SIX1Q15475 284 aaPredicted RBP19.26■□□□□ 0.67
SS18-208ENST00000577751 OASLQ15646 514 aaKnown RBP19.26■□□□□ 0.67
SS18-208ENST00000577751 SLC1A5Q15758 541 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 PROX2Q3B8N5 592 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 FAXCQ5TGI0 409 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 KCTD16Q68DU8 428 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 RAET1GQ6H3X3 334 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 ADAMTSL4Q6UY14 1074 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 FAM71DQ8N9W8 422 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 IPMKQ8NFU5 416 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 ATG4AQ8WYN0 398 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 RTP4Q96DX8 246 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 CNDP2Q96KP4 475 aaKnown RBP19.26■□□□□ 0.67
SS18-208ENST00000577751 AGAP2Q99490 1192 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 LRRC61Q9BV99 259 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 RIOK2Q9BVS4 552 aaKnown RBP19.26■□□□□ 0.67
SS18-208ENST00000577751 SLC13A1Q9BZW2 595 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 FGF22Q9HCT0 170 aa19.26■□□□□ 0.67
SS18-208ENST00000577751 PHPT1Q9NRX4 125 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms