RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 RXRGP48443 463 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GDF10P55107 478 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 DPTQ07507 201 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SNX1Q13596 522 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 NFATC4Q14934 902 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SLC1A5Q15758 541 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 FAM182AQ5T1J6 154 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 C4orf22Q6V702 233 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 Q6ZVL8 140 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TECPR1Q7Z6L1 1165 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SPATS2Q86XZ4 545 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SLC22A18ASQ8N1D0 253 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CBARPQ8N350 705 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ACTRT1Q8TDG2 376 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 NAPGQ99747 312 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GPR63Q9BZJ6 419 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SLC32A1Q9H598 525 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 LRRC40Q9H9A6 602 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ZFYVE1Q9HBF4 777 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PHPT1Q9NRX4 125 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PAK5Q9P286 719 aa12.7□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CTAGE9A4FU28 777 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CLDN7O95471 211 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 HOXC4P09017 264 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 NME1P15531 152 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CSRP1P21291 193 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 KIAA1024LP59773 190 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 HNRNPKP61978 463 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PTSQ03393 145 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 INPP5AQ14642 412 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SIRPB2Q5JXA9 342 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 RAET1GQ6H3X3 334 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GSTA5Q7RTV2 222 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 LYSMD3Q7Z3D4 306 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 NLRP8Q86W28 1048 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 KLHDC8BQ8IXV7 354 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SLC25A41Q8N5S1 370 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 AP2M1Q96CW1 435 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 WDR92Q96MX6 357 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SMIM14Q96QK8 99 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TBL1YQ9BQ87 522 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 APOOQ9BUR5 198 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 IL21RQ9HBE5 538 aa12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 NFKBIL1Q9UBC1 381 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP3-203ENST00000577442 KNTC1P50748 2209 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 E7EVH7 732 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 AP2A1O95782 977 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SLC4A1P02730 911 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PIRTP0C851 137 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 MYCLP1P12525 358 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CD59P13987 128 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ADRA1AP35348 466 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TRIM23P36406 574 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GRK6P43250 576 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CHRNA4P43681 627 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GPR1P46091 355 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SPINT3P49223 89 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 BLKP51451 505 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 DCDC1P59894 354 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 FZD2Q14332 565 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PTPRRQ15256 657 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CDKN3Q16667 212 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ZDHHC20Q5W0Z9 365 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PNCKQ6P2M8 343 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 RANBP10Q6VN20 620 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GLT6D1Q7Z4J2 308 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 LINC00523Q86TU6 105 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 NAXDQ8IW45 347 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PRELID2Q8N945 189 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 BLOC1S5Q8TDH9 187 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 COG1Q8WTW3 980 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 BTN2A2Q8WVV5 523 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 MS4A14Q96JA4 679 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 WDR24Q96S15 920 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GORASP1Q9BQQ3 440 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ABCG8Q9H221 673 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 DNAJC28Q9NX36 388 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SHOC2Q9UQ13 582 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SCN8AQ9UQD0 1980 aa12.68□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GOLGA8CPA6NN73 597 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PPFIA2O75334 1257 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 METTL18O95568 372 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CSF2P04141 144 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 HMGCLP35914 325 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 LMAN1P49257 510 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PDE1BQ01064 536 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 IL9RQ01113 521 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PPARDQ03181 441 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CYP1B1Q16678 543 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 HS1BP3Q53T59 392 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PRAMEF14Q5SWL7 426 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PAPD7Q5XG87 772 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PDPK2PQ6A1A2 396 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ADAMTSL4Q6UY14 1074 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TMC3Q7Z5M5 1100 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 HEATR4Q86WZ0 1026 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PLA2G15Q8NCC3 412 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SAP25Q8TEE9 199 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GRK7Q8WTQ7 553 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms