RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 SYNDIG1Q9H7V2 258 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 ACTR8Q9H981 624 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 MID1IP1Q9NPA3 183 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 ADA2Q9NZK5 511 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 ZNHIT2Q9UHR6 403 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 NCKAP1Q9Y2A7 1128 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 PARP14Q460N5 1801 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 NEMP2A6NFY4 417 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 CLASP2O75122 1294 aaKnown RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 TULP3O75386 442 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 DNTTP04053 509 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 ENO3P13929 434 aaPredicted RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 PKMP14618 531 aaKnown RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 SERPINB5P36952 375 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 CTSOP43234 321 aaPredicted RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 LIMK2P53671 638 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 USP4Q13107 963 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 MYLK3Q32MK0 819 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 SH2D4BQ5SQS7 431 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 KYAT3Q6YP21 454 aaKnown RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 CYP4V2Q6ZWL3 525 aaPredicted RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 IFNEQ86WN2 208 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 LINGO1Q96FE5 620 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 ZNF599Q96NL3 588 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 SAMD11Q96NU1 681 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 RAB3IPQ96QF0 476 aaPredicted RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 RBBP8Q99708 897 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 TMEM120AQ9BXJ8 343 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 MIR1-1HGQ9H1L0 117 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 MFSD1Q9H3U5 465 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 CASS4Q9NQ75 786 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 ELOVL2Q9NXB9 296 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 IQCF5A8MTL0 148 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 B2RBV5 119 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 H0YGN5 161 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 PRNPP04156 253 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 DLDP09622 509 aaKnown RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 ARSAP15289 507 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 GRK2P25098 689 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 DDX6P26196 483 aaKnown RBP eCLIP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 HALP42357 657 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 ERVK-21P61565 698 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 RFTN1Q14699 578 aaPredicted RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 INSCQ1MX18 579 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 CCDC153Q494R4 210 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 FAM46CQ5VWP2 391 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 SEL1L3Q68CR1 1132 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 C22orf39Q6P5X5 142 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 SERPINA9Q86WD7 417 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 RGL4Q8IZJ4 473 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 STK40Q8N2I9 435 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 RFWD2Q8NHY2 731 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 HERVK_113Q902F9 699 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 IMP4Q96G21 291 aaKnown RBP8.37□□□□□ -1.07
NCBP3-205ENST00000575815 PANX3Q96QZ0 392 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 IL12RB2Q99665 862 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 VN1R3Q9BXE9 311 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 NFS1Q9Y697 457 aa8.37□□□□□ -1.07
NCBP3-205ENST00000575815 TRBV23OR9-2A0A075B6M9 112 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 SYCE1LA8MT33 242 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 WASH3PC4AMC7 463 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 PRPF4O43172 522 aaKnown RBP eCLIP8.36□□□□□ -1.07
NCBP3-205ENST00000575815 RGRP47804 291 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 GRIA4P48058 902 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 THOP1P52888 689 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 NAB1Q13506 487 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 UBXN2BQ14CS0 331 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 PTPRRQ15256 657 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 CRY1Q16526 586 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 PLA2G4EQ3MJ16 856 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 ANKS6Q68DC2 871 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 FAM45BPQ6NSW5 357 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 GDPD4Q6W3E5 623 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 Q6ZVL8 140 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 FAM45AQ8TCE6 357 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 TRPC4APQ8TEL6 797 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 SCAMP4Q969E2 229 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 THAP1Q9NVV9 213 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 HAO1Q9UJM8 370 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 CDYLQ9Y232 598 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 PLLPQ9Y342 182 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.36□□□□□ -1.07
NCBP3-205ENST00000575815 TRPM7Q96QT4 1865 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 TTC34A8MYJ7 566 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 NIPSNAP2O75323 286 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 TCN1P20061 433 aaPredicted RBP8.36□□□□□ -1.07
NCBP3-205ENST00000575815 SERPINB3P29508 390 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 IRF9Q00978 393 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 RBM20Q5T481 1227 aaKnown RBP8.36□□□□□ -1.07
NCBP3-205ENST00000575815 C11orf96Q7Z7L8 435 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 CPNE9Q8IYJ1 553 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 C2orf73Q8N5S3 287 aaPredicted RBP8.36□□□□□ -1.07
NCBP3-205ENST00000575815 ZNF513Q8N8E2 541 aaPredicted RBP8.36□□□□□ -1.07
NCBP3-205ENST00000575815 STAG3L4Q8TBR4 150 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 ACAT2Q9BWD1 397 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 TTLL2Q9BWV7 592 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 LIMD1Q9UGP4 676 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 ARHGAP26Q9UNA1 814 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 ZNF711Q9Y462 761 aa8.36□□□□□ -1.07
NCBP3-205ENST00000575815 ACTL7BQ9Y614 415 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms