RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 ANP32BQ92688 251 aaKnown RBP20.69■□□□□ 0.9
HCFC1R1-208ENST00000575214 TSACCQ96A04 125 aaPredicted RBP20.69■□□□□ 0.9
HCFC1R1-208ENST00000575214 FCRL5Q96RD9 977 aa20.69■□□□□ 0.9
HCFC1R1-208ENST00000575214 SPASTQ9UBP0 616 aa20.69■□□□□ 0.9
HCFC1R1-208ENST00000575214 ANGPTL2Q9UKU9 493 aa20.69■□□□□ 0.9
HCFC1R1-208ENST00000575214 PPP2R2CQ9Y2T4 447 aa20.69■□□□□ 0.9
HCFC1R1-208ENST00000575214 TRIM38O00635 465 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 SCAMP1O15126 338 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 KCNN4O15554 427 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 SIGLEC6O43699 453 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 STK10O94804 968 aaKnown RBP20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 KELP23276 732 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 TRIM23P36406 574 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 TNNT3P45378 269 aaPredicted RBP20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 DNAJC3Q13217 504 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 ALG11Q2TAA5 492 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 RD3Q7Z3Z2 195 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 CCHCR1Q8TD31 782 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 AP2M1Q96CW1 435 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 PHPT1Q9NRX4 125 aaPredicted RBP20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 TOR4AQ9NXH8 423 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 NLGN3Q9NZ94 848 aa20.68■□□□□ 0.9
HCFC1R1-208ENST00000575214 ACACBO00763 2458 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 HYAL3O43820 417 aaPredicted RBP20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 RASGRP1O95267 797 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 NDST3O95803 873 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 TOP3BO95985 862 aaKnown RBP20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 HOXC4P09017 264 aaPredicted RBP20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 PIRTP0C851 137 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 GPR1P46091 355 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 HK3P52790 923 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 WNT3AP56704 352 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 SRP54P61011 504 aaKnown RBP20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 KLF1Q13351 362 aaPredicted RBP20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 C1orf61Q13536 156 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 RPS6KA1Q15418 735 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 MEI1Q5TIA1 1274 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 ITPRIPL1Q6GPH6 555 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 HEATR4Q86WZ0 1026 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 OR56A4Q8NGH8 313 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 OXNAD1Q96HP4 312 aaPredicted RBP20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 LRRC61Q9BV99 259 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 DUSP23Q9BVJ7 150 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 LGR4Q9BXB1 951 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 ABCG8Q9H221 673 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 CSNK1G3Q9Y6M4 447 aa20.67■□□□□ 0.9
HCFC1R1-208ENST00000575214 TMEM202A6NGA9 273 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 PDE2AO00408 941 aaPredicted RBP20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 SLC4A1P02730 911 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 MYCLP1P12525 358 aaPredicted RBP20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 CTSEP14091 401 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 SPINK2P20155 84 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 DPTQ07507 201 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 CDKN3Q16667 212 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 KDELC1Q6UW63 502 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 NYAP1Q6ZVC0 841 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 ZNF765Q7L2R6 523 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 LYSMD3Q7Z3D4 306 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 CHCHD4Q8N4Q1 142 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 IPMKQ8NFU5 416 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 TRIM58Q8NG06 486 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 ADAMTS14Q8WXS8 1223 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 SCAMP4Q969E2 229 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 PDXPQ96GD0 296 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 GBA3Q9H227 469 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 PKD2L2Q9NZM6 624 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 MOSPD1Q9UJG1 213 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 SHOC2Q9UQ13 582 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 COL5A1P20908 1838 aaPredicted RBP20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 CHD8Q9HCK8 2581 aa20.66■□□□□ 0.9
HCFC1R1-208ENST00000575214 TCRBV7S2A1N4TA0A589 114 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 GCATO75600 419 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 ZNF189O75820 626 aaPredicted RBP20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 GIMD1P0DJR0 217 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 SHC2P98077 582 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 DAB2P98082 770 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 CDK3Q00526 305 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 MPP3Q13368 585 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 TCEA2Q15560 299 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 DEFB133Q30KQ1 61 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 PROX2Q3B8N5 592 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 ANKRD20A2Q5SQ80 823 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 ANKRD20A1Q5TYW2 823 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 ANKRD20A3Q5VUR7 823 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 RAVER1Q8IY67 606 aaKnown RBP20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 NRSN1Q8IZ57 195 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 OR1E3Q8WZA6 343 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 TBATAQ96M53 351 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 TEX101Q9BY14 249 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 ZFYVE1Q9HBF4 777 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 MAGEE1Q9HCI5 957 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 FGF22Q9HCT0 170 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 R3HDM2Q9Y2K5 976 aaKnown RBP20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 TDRD6O60522 2096 aaKnown RBP20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 CEP295Q9C0D2 2601 aa20.65■□□□□ 0.9
HCFC1R1-208ENST00000575214 TNFP01375 233 aa20.64■□□□□ 0.89
HCFC1R1-208ENST00000575214 CKMT2P17540 419 aa20.64■□□□□ 0.89
HCFC1R1-208ENST00000575214 TEAD1P28347 426 aa20.64■□□□□ 0.89
HCFC1R1-208ENST00000575214 SPINT3P49223 89 aa20.64■□□□□ 0.89
HCFC1R1-208ENST00000575214 ACADVLP49748 655 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms