RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SIPA1Q96FS4 1042 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 MRGPRX1Q96LB2 322 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 UGT1A7Q9HAW7 530 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 UGT1A10Q9HAW8 530 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 UGT1A8Q9HAW9 530 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 ZFATQ9P243 1243 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 VPS18Q9P253 973 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 SCN8AQ9UQD0 1980 aa24.02■■□□□ 1.44
ATPAF1-213ENST00000574428 TLDC2A0PJX2 215 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 IVLP07476 585 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 F7P08709 466 aaPredicted RBP24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 PSMA3P25788 255 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 SUOXP51687 545 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 STC1P52823 247 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 ELP6Q0PNE2 266 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 KRT71Q3SY84 523 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 RFLNAQ6ZTI6 216 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 PTAR1Q7Z6K3 402 aaPredicted RBP24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 PAFAH2Q99487 392 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 OMDQ99983 421 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 FBXL12Q9NXK8 326 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 VCANP13611 3396 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 NEMP1O14524 444 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 RASGRF2O14827 1237 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 SLC7A4O43246 635 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 GOT2P00505 430 aaKnown RBP24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 ZNF30P17039 623 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 BPIP17213 487 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 THOC5Q13769 683 aaKnown RBP24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 KIAA1324Q6UXG2 1013 aaKnown RBP24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 SYT13Q7L8C5 426 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 HSD11B1LQ7Z5J1 315 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 LRRC6Q86X45 466 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 HMGB4Q8WW32 186 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 CDKL2Q92772 493 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 MFSD1Q9H3U5 465 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 CTNNAL1Q9UBT7 734 aa24.01■■□□□ 1.43
ATPAF1-213ENST00000574428 TCEA3O75764 348 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 FAM155BO75949 473 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 ELFN1P0C7U0 828 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 GABRG2P18507 467 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 HADHAP40939 763 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 LIG3P49916 1009 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 TAS2R38P59533 333 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 TEDDM1Q5T9Z0 273 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 NEPROQ6NW34 567 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 ZNF449Q6P9G9 518 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 RAB7BQ96AH8 199 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 SH3GL2Q99962 352 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 TMEM109Q9BVC6 243 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 FADS3Q9Y5Q0 445 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 PSAT1Q9Y617 370 aa24■■□□□ 1.43
ATPAF1-213ENST00000574428 ATG13O75143 517 aa23.99■■□□□ 1.43
ATPAF1-213ENST00000574428 DGKEP52429 567 aa23.99■■□□□ 1.43
ATPAF1-213ENST00000574428 TJAP1Q5JTD0 557 aa23.99■■□□□ 1.43
ATPAF1-213ENST00000574428 ZNF470Q6ECI4 717 aa23.99■■□□□ 1.43
ATPAF1-213ENST00000574428 LIPIQ6XZB0 460 aa23.99■■□□□ 1.43
ATPAF1-213ENST00000574428 OTUD6BQ8N6M0 293 aa23.99■■□□□ 1.43
ATPAF1-213ENST00000574428 SLC44A1Q8WWI5 657 aa23.99■■□□□ 1.43
ATPAF1-213ENST00000574428 POLMQ9NP87 494 aaPredicted RBP23.99■■□□□ 1.43
ATPAF1-213ENST00000574428 MARCH4Q9P2E8 410 aaPredicted RBP23.99■■□□□ 1.43
ATPAF1-213ENST00000574428 PRSS56P0CW18 603 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 MC4RP32245 332 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 MSH2P43246 934 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 ZBTB16Q05516 673 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 PEX6Q13608 980 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 TTC31Q49AM3 519 aaPredicted RBP23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 AFTPHQ6ULP2 937 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 FAM151BQ6UXP7 276 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 MARK2Q7KZI7 788 aaKnown RBP23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 DENND6AQ8IWF6 608 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 PNPLA1Q8N8W4 532 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 GPR26Q8NDV2 337 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 OR4L1Q8NH43 312 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 FAM167BQ9BTA0 163 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 DHRS4Q9BTZ2 278 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 ROPN1BQ9BZX4 212 aaPredicted RBP23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 CENPHQ9H3R5 247 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 ROPN1Q9HAT0 212 aaPredicted RBP23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 FETUBQ9UGM5 382 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 ETV3P41162 512 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 SLC1A2P43004 574 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 SPINT3P49223 89 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 XIAPP98170 497 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 DCAKDQ8WVC6 231 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 CLDN23Q96B33 292 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 IL26Q9NPH9 171 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 CD93Q9NPY3 652 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 TBK1Q9UHD2 729 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 SLC24A2Q9UI40 661 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 CD84Q9UIB8 345 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 SCML1Q9UN30 329 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 IKBKGQ9Y6K9 419 aa23.98■■□□□ 1.43
ATPAF1-213ENST00000574428 H7C0S8 307 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 GAPDHSO14556 408 aaPredicted RBP23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 GPR39O43194 453 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 MMP20O60882 483 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 DCNP07585 359 aaKnown RBP23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 INHBAP08476 426 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms