RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 YY2O15391 372 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 MAFKO60675 156 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 MAP3K6O95382 1288 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 CD48P09326 243 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 H2AFXP16104 143 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 VIPR1P32241 457 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 NOP2P46087 812 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 KIAA1024LP59773 190 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 TRAF2Q12933 501 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 SPIDRQ14159 915 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 DPYSL3Q14195 570 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 BRD3Q15059 726 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 AGERQ15109 404 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 CNGA3Q16281 694 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 PERM1Q5SV97 790 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 ARMC12Q5T9G4 340 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 CDCP2Q5VXM1 449 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 TIGD7Q6NT04 549 aaPredicted RBP9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 RBM44Q6ZP01 1051 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 USP45Q70EL2 814 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 NDUFAF2Q8N183 169 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 PGBD5Q8N414 524 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 ARL10Q8N8L6 244 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 KYQ8NBH2 561 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 OR56A4Q8NGH8 313 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 TPCN2Q8NHX9 752 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 FUBP1Q96AE4 644 aaKnown RBP9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 CAPZA3Q96KX2 299 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 CCDC3Q9BQI4 270 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 MGME1Q9BQP7 344 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 NOD2Q9HC29 1040 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 ARFGAP3Q9NP61 516 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 HAUS2Q9NVX0 235 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 UVRAGQ9P2Y5 699 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 PADI4Q9UM07 663 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 SCN8AQ9UQD0 1980 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 IGSF10Q6WRI0 2623 aa9.68□□□□□ -0.86
NPLOC4-216ENST00000574344 LOC400499M0QZD8 3231 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 BPTFQ12830 3046 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 CCDC151A5D8V7 595 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 RCCD1A6NED2 376 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 TMEM202A6NGA9 273 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 EIF4E1BA6NMX2 242 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 B4DGG1 531 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 HTRA2O43464 458 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 PROSCO94903 275 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 KRT7P08729 469 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 TMEM253P0C7T8 217 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 KRT10P13645 584 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 CTPS1P17812 591 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 ITPKBP27987 946 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 EIF2S3P41091 472 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 GARSP41250 739 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 EPHB1P54762 984 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 PCBP4P57723 403 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 GPS2Q13227 327 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 ISXQ2M1V0 245 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 TBC1D25Q3MII6 688 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 ATP13A4Q4VNC1 1196 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 ODF2Q5BJF6 829 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 RALGPS1Q5JS13 557 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 NCBP2-AS2Q69YL0 99 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 RAET1GQ6H3X3 334 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 TAF8Q7Z7C8 310 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 CPNE8Q86YQ8 564 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 MAP7D3Q8IWC1 876 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 LSMEM2Q8N112 164 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 SDR16C5Q8N3Y7 309 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 SNIP1Q8TAD8 396 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 WDR48Q8TAF3 677 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 OR1E3Q8WZA6 343 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 FGF11Q92914 225 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 ATXN7L3BQ96GX2 97 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 CRELD1Q96HD1 420 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 NAF1Q96HR8 494 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 NSMCE3Q96MG7 304 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 SEMA3CQ99985 751 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 ZNF670Q9BS34 389 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 PACSIN1Q9BY11 444 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 POLR1EQ9GZS1 481 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 POLR1BQ9H9Y6 1135 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 CYP4F12Q9HCS2 524 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 MRPL40Q9NQ50 206 aaKnown RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 PHPT1Q9NRX4 125 aaPredicted RBP9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 KCTD5Q9NXV2 234 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 LCMT1Q9UIC8 334 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 PHTF1Q9UMS5 762 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 TFR2Q9UP52 801 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 SATB2Q9UPW6 733 aa9.67□□□□□ -0.86
NPLOC4-216ENST00000574344 PRSS38A1L453 326 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 GRID2IPA4D2P6 1211 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 NPIPB15A6NHN6 443 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 PDE2AO00408 941 aaPredicted RBP9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 CES2O00748 559 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 ATP8B1O43520 1251 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 TCEA3O75764 348 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 HEXIM1O94992 359 aaKnown RBP9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 PGLSO95336 258 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 PEX11BO96011 259 aa9.66□□□□□ -0.86
NPLOC4-216ENST00000574344 MYCLP1P12525 358 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms