RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 PACRGLQ8N7B6 248 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 GABPB2Q8TAK5 448 aaPredicted RBP19.06■□□□□ 0.64
SCARF1-206ENST00000573852 TWIST2Q8WVJ9 160 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 BIRC8Q96P09 236 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 NSUN5Q96P11 429 aaKnown RBP19.06■□□□□ 0.64
SCARF1-206ENST00000573852 PKMYT1Q99640 499 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 ACBD6Q9BR61 282 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 ADI1Q9BV57 179 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 MUC3BQ9H195 1237 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 MFSD1Q9H3U5 465 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 MID1IP1Q9NPA3 183 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 RGS18Q9NS28 235 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 MROH6A6NGR9 719 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 CD1DP15813 335 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 ZNF549Q6P9A3 640 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 PLEKHH3Q7Z736 793 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 CMTR2Q8IYT2 770 aaKnown RBP19.06■□□□□ 0.64
SCARF1-206ENST00000573852 OR10T2Q8NGX3 314 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 ITFG2Q969R8 447 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 MS4A4AQ96JQ5 239 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 TUBB1Q9H4B7 451 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 DNAAF2Q9NVR5 837 aaKnown RBP19.06■□□□□ 0.64
SCARF1-206ENST00000573852 ST3GAL5Q9UNP4 418 aa19.06■□□□□ 0.64
SCARF1-206ENST00000573852 A0A087WXM4 84 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 ANGPT2O15123 496 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 SEC24DO94855 1032 aaPredicted RBP19.05■□□□□ 0.64
SCARF1-206ENST00000573852 ODC1P11926 461 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 HSD17B1P14061 328 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 SLC6A2P23975 617 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 SLC26A3P40879 764 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 MERTKQ12866 999 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 OR4D1Q15615 310 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 KLHL35Q6PF15 583 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 AGMOQ6ZNB7 445 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 GPR141Q7Z602 305 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 TFAP2DQ7Z6R9 452 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 MIER2Q8N344 545 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 TRPC4APQ8TEL6 797 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 HASPINQ8TF76 798 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 CENPFP49454 3210 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 UBXN8O00124 270 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 MAGEB3O15480 346 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 FGF4P08620 206 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 HAPLN1P10915 354 aaPredicted RBP19.05■□□□□ 0.64
SCARF1-206ENST00000573852 INPP5AQ14642 412 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 GEN1Q17RS7 908 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 LCN8Q6JVE9 175 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 DDIASQ8IXT1 998 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 ADGRG5Q8IZF4 528 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 ISOC1Q96CN7 298 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 HSPBAP1Q96EW2 488 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 HMCESQ96FZ2 354 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 TRIM62Q9BVG3 475 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 NMUR1Q9HB89 426 aa19.05■□□□□ 0.64
SCARF1-206ENST00000573852 AZIN1O14977 448 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 CLIC3O95833 236 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 IL10P22301 178 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 ETFBP38117 255 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 APLP1P51693 650 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 SLC5A3P53794 718 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 TMED1Q13445 227 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 PTPRCAPQ14761 206 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 PFKFB4Q16877 469 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 SIRPB2Q5JXA9 342 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 PIK3R6Q5UE93 754 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 DHRS4L2Q6PKH6 230 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 LRRC49Q8IUZ0 686 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 TRIM15Q9C019 465 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 TUBA8Q9NY65 449 aaPredicted RBP19.04■□□□□ 0.64
SCARF1-206ENST00000573852 ACTR3BQ9P1U1 418 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 OAZ3Q9UMX2 235 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 CCL15-CCL14A0A0B4J2E2 113 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 A0A1B0GTL3 188 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 ARPC2O15144 300 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 MTHFD2P13995 350 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 FDXRP22570 491 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 FASP25445 335 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 PSMA4P25789 261 aaKnown RBP19.04■□□□□ 0.64
SCARF1-206ENST00000573852 RENBPP51606 427 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 MLLT6P55198 1093 aaPredicted RBP19.04■□□□□ 0.64
SCARF1-206ENST00000573852 CCL15Q16663 113 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 SLC36A3Q495N2 470 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 ZBED5Q49AG3 693 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 PRMT9Q6P2P2 845 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 LZICQ8WZA0 190 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 ABTB1Q969K4 478 aaPredicted RBP19.04■□□□□ 0.64
SCARF1-206ENST00000573852 LRRC58Q96CX6 371 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 PABPC5Q96DU9 382 aaKnown RBP19.04■□□□□ 0.64
SCARF1-206ENST00000573852 FEM1CQ96JP0 617 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 RPL10LQ96L21 214 aaKnown RBP19.04■□□□□ 0.64
SCARF1-206ENST00000573852 MYRFLQ96LU7 910 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 TBATAQ96M53 351 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 SLC52A3Q9NQ40 469 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 VPS45Q9NRW7 570 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 CDC14AQ9UNH5 594 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 BTRCQ9Y297 605 aa19.04■□□□□ 0.64
SCARF1-206ENST00000573852 RNF103-CHMP3A0A140T963 221 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 ACOX3O15254 700 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 LDB2O43679 373 aa19.03■□□□□ 0.64
SCARF1-206ENST00000573852 B3GAT3O94766 335 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms