RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 PMS2P1A4D2B8 440 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 AKR1B15C9JRZ8 316 aaPredicted RBP17.4■□□□□ 0.38
SMG6-214ENST00000573827 TCEA3O75764 348 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 LCA5LO95447 670 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 HOXB3P14651 431 aaPredicted RBP17.4■□□□□ 0.38
SMG6-214ENST00000573827 KELP23276 732 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 ITPKBP27987 946 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 LSSP48449 732 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 RPIAP49247 311 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 STC1P52823 247 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 HADHBP55084 474 aaKnown RBP17.4■□□□□ 0.38
SMG6-214ENST00000573827 CDK3Q00526 305 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 IGF2-ASQ6U949 168 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 USP45Q70EL2 814 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 PDZD3Q86UT5 571 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 NLRP8Q86W28 1048 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 C17orf82Q86X59 251 aaPredicted RBP17.4■□□□□ 0.38
SMG6-214ENST00000573827 GKN2Q86XP6 184 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 CCDC13Q8IYE1 715 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 FGF11Q92914 225 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 GLMNQ92990 594 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 SCARF2Q96GP6 870 aaPredicted RBP17.4■□□□□ 0.38
SMG6-214ENST00000573827 ABCG4Q9H172 646 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 ABCG8Q9H221 673 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 KCTD5Q9NXV2 234 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 SIRPGQ9P1W8 387 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 GPR34Q9UPC5 381 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 CHKBQ9Y259 395 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 SLC17A4Q9Y2C5 497 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 HYOU1Q9Y4L1 999 aa17.4■□□□□ 0.38
SMG6-214ENST00000573827 A0A1W2PQM1 296 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 CAPN8A6NHC0 703 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 KCNK1O00180 336 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 USP12O75317 370 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 JCHAINP01591 159 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 MPOP05164 745 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 CTSEP14091 401 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 SKOR1P84550 965 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 DENND2CQ68D51 928 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 RBM44Q6ZP01 1051 aaKnown RBP17.39■□□□□ 0.37
SMG6-214ENST00000573827 PAF1Q8N7H5 531 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 GPBAR1Q8TDU6 330 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 SCAMP4Q969E2 229 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 CCDC74AQ96AQ1 378 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 TADA1Q96BN2 335 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 ATXN7L3BQ96GX2 97 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 TRIB3Q96RU7 358 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 WDR24Q96S15 920 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 AGAP2Q99490 1192 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 CYP4F12Q9HCS2 524 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 GULP1Q9UBP9 304 aa17.39■□□□□ 0.37
SMG6-214ENST00000573827 PIEZO2Q9H5I5 2752 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 TPM1P09493 284 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 COMTP21964 271 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 SLC1A1P43005 524 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 RPL26P61254 145 aaKnown RBP17.38■□□□□ 0.37
SMG6-214ENST00000573827 GABREP78334 506 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 ITKQ08881 620 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 HLTFQ14527 1009 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMG6-214ENST00000573827 QPCTQ16769 361 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 TSR1Q2NL82 804 aaKnown RBP17.38■□□□□ 0.37
SMG6-214ENST00000573827 CERCAMQ5T4B2 595 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 MFSD7Q6UXD7 560 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 NPNTQ6UXI9 565 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 ADAMTSL4Q6UY14 1074 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 ZNF765Q7L2R6 523 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMG6-214ENST00000573827 SCG3Q8WXD2 468 aaKnown RBP17.38■□□□□ 0.37
SMG6-214ENST00000573827 GRAMD1AQ96CP6 724 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 POLR1BQ9H9Y6 1135 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 PHPT1Q9NRX4 125 aaPredicted RBP17.38■□□□□ 0.37
SMG6-214ENST00000573827 CD84Q9UIB8 345 aa17.38■□□□□ 0.37
SMG6-214ENST00000573827 RPL26L1Q9UNX3 145 aaKnown RBP17.38■□□□□ 0.37
SMG6-214ENST00000573827 GCN1Q92616 2671 aaKnown RBP17.37■□□□□ 0.37
SMG6-214ENST00000573827 PDE2AO00408 941 aaPredicted RBP17.37■□□□□ 0.37
SMG6-214ENST00000573827 IVLP07476 585 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 ZNF30P17039 623 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 NFKBIAP25963 317 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 CDKN2BP42772 138 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 POLD2P49005 469 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 ADCY2Q08462 1091 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 ARHGEF7Q14155 803 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 B3GNT8Q7Z7M8 397 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 RAVER1Q8IY67 606 aaKnown RBP17.37■□□□□ 0.37
SMG6-214ENST00000573827 WDR48Q8TAF3 677 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 EID2BQ96D98 161 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 COX14Q96I36 57 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 GOLPH3Q9H4A6 298 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 PCDH9Q9HC56 1237 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 SPATS2LQ9NUQ6 558 aaKnown RBP17.37■□□□□ 0.37
SMG6-214ENST00000573827 TRNAU1APQ9NX07 287 aaKnown RBP17.37■□□□□ 0.37
SMG6-214ENST00000573827 APPL1Q9UKG1 709 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 CNOT6Q9ULM6 557 aaKnown RBP17.37■□□□□ 0.37
SMG6-214ENST00000573827 SUFUQ9UMX1 484 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 TFR2Q9UP52 801 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 DOLKQ9UPQ8 538 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 HEY1Q9Y5J3 304 aa17.37■□□□□ 0.37
SMG6-214ENST00000573827 APOL1O14791 398 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 CLDN7O95471 211 aa17.36■□□□□ 0.37
SMG6-214ENST00000573827 KRT1P04264 644 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms