RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.27■□□□□ 0.2
POLR2A-201ENST00000572844 GLT6D1Q7Z4J2 308 aa16.27■□□□□ 0.2
POLR2A-201ENST00000572844 MDGA1Q8NFP4 955 aa16.27■□□□□ 0.2
POLR2A-201ENST00000572844 RCN3Q96D15 328 aa16.27■□□□□ 0.2
POLR2A-201ENST00000572844 ATOH8Q96SQ7 321 aa16.27■□□□□ 0.2
POLR2A-201ENST00000572844 ADGRE3Q9BY15 652 aa16.27■□□□□ 0.2
POLR2A-201ENST00000572844 DERL2Q9GZP9 239 aa16.27■□□□□ 0.2
POLR2A-201ENST00000572844 GKN1Q9NS71 199 aa16.27■□□□□ 0.2
POLR2A-201ENST00000572844 MAFFQ9ULX9 164 aa16.27■□□□□ 0.2
POLR2A-201ENST00000572844 SLC4A1P02730 911 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 PIRTP0C851 137 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 CD1EP15812 388 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 PLK1P53350 603 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 ARF5P84085 180 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 XIAPP98170 497 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 PDAP1Q13442 181 aaKnown RBP16.26■□□□□ 0.19
POLR2A-201ENST00000572844 RAB33AQ14088 237 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 IKBKEQ14164 716 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 PIGGQ5H8A4 983 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 OR4K2Q8NGD2 314 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 SLC26A7Q8TE54 656 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 SH3RF2Q8TEC5 729 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 KIAA1191Q96A73 305 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 LBHD1Q9BQE6 289 aaPredicted RBP16.26■□□□□ 0.19
POLR2A-201ENST00000572844 VCX3BQ9H321 246 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 TNFRSF12AQ9NP84 129 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 TAS2R13Q9NYV9 303 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 HACD3Q9P035 362 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 G3BP2Q9UN86 482 aaKnown RBP16.26■□□□□ 0.19
POLR2A-201ENST00000572844 RAI2Q9Y5P3 530 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 DENND4CQ5VZ89 1909 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 LCHNA4D1U4 455 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 H7C0S8 307 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 CBX4O00257 560 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 UBFD1O14562 309 aaKnown RBP16.26■□□□□ 0.19
POLR2A-201ENST00000572844 PFDN6O15212 129 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 SUPT7LO94864 414 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 BAG2O95816 211 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 CD160O95971 181 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 C1QTNF8P60827 252 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 KLC1Q07866 573 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 STX5Q13190 355 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 PTK2BQ14289 1009 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 TAF12Q16514 161 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 ZNF423Q2M1K9 1284 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 CNKSR3Q6P9H4 555 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 NCEH1Q6PIU2 408 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 KBTBD2Q8IY47 623 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 CLYBLQ8N0X4 340 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 TOX2Q96NM4 488 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 ZDHHC7Q9NXF8 308 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 HTTP42858 3142 aa16.26■□□□□ 0.19
POLR2A-201ENST00000572844 CARNS1A5YM72 827 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 CASQ2O14958 399 aaPredicted RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 UBDO15205 165 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 KERAO60938 352 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 NDUFS3O75489 264 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 SKAP2O75563 359 aaPredicted RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 SORBS2O94875 1100 aaKnown RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 MTHFD2P13995 350 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 PSMD8P48556 350 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 CLCN4P51793 760 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 PLD1Q13393 1074 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 ART3Q13508 389 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 GSTA3Q16772 222 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 TCHHL1Q5QJ38 904 aaPredicted RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 SLC39A11Q8N1S5 342 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 STAG3L4Q8TBR4 150 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 PYDC1Q8WXC3 89 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 CCDC124Q96CT7 223 aaKnown RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 CDRT15Q96T59 188 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 ECSITQ9BQ95 431 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 MUC3BQ9H195 1237 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 CCDC68Q9H2F9 335 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 WDR41Q9HAD4 459 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 MED16Q9Y2X0 877 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 OAS3Q9Y6K5 1087 aaKnown RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 C2orf78A6NCI8 922 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 A6NHS1 94 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 ANKRD66B4E2M5 251 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 GFRA2O00451 464 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 SMNDC1O75940 238 aaKnown RBP eCLIP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 RHOBTB1O94844 696 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 UPP2O95045 317 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 PYGLP06737 847 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 APLP1P51693 650 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 OR4D1Q15615 310 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 UGT3A2Q3SY77 523 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 SETMARQ53H47 684 aaPredicted RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 LARP4Q71RC2 724 aaKnown RBP eCLIP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 NKAPQ8N5F7 415 aaKnown RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 PTGR2Q8N8N7 351 aaPredicted RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 LPCAT1Q8NF37 534 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 WBP2Q969T9 261 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 ZNF558Q96NG5 402 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 MRPL40Q9NQ50 206 aaKnown RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 GEMIN8Q9NWZ8 242 aaKnown RBP16.25■□□□□ 0.19
POLR2A-201ENST00000572844 SARDHQ9UL12 918 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 COMMD10Q9Y6G5 202 aa16.25■□□□□ 0.19
POLR2A-201ENST00000572844 TSPAN3O60637 253 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms