RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 FZD2Q14332 565 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 LRRC14Q15048 493 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 SMAD1Q15797 465 aaKnown RBP7.48□□□□□ -1.21
NUP88-205ENST00000572809 MEI1Q5TIA1 1274 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 MARC1Q5VT66 337 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 DHRS13Q6UX07 377 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 TMPRSS12Q86WS5 348 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 LRRC49Q8IUZ0 686 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 MAP7D3Q8IWC1 876 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 BBS5Q8N3I7 341 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 PAF1Q8N7H5 531 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 SLC35G2Q8TBE7 412 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 FAM71BQ8TC56 605 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 NSMCE1Q8WV22 266 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 BTN2A2Q8WVV5 523 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 CCDC42Q96M95 316 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 PSKH2Q96QS6 385 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 PACSIN1Q9BY11 444 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 NHEJ1Q9H9Q4 299 aaPredicted RBP7.48□□□□□ -1.21
NUP88-205ENST00000572809 PCDH12Q9NPG4 1184 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 MBNL1Q9NR56 388 aaKnown RBP7.48□□□□□ -1.21
NUP88-205ENST00000572809 LATS2Q9NRM7 1088 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 GPR27Q9NS67 375 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 ABHD10Q9NUJ1 306 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 UCKL1Q9NWZ5 548 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 RCOR3Q9P2K3 495 aaPredicted RBP7.48□□□□□ -1.21
NUP88-205ENST00000572809 LCMT1Q9UIC8 334 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 COQ6Q9Y2Z9 468 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 CHD8Q9HCK8 2581 aa7.48□□□□□ -1.21
NUP88-205ENST00000572809 A0A1W2PQ67 120 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 TMEM110-MUSTN1A8MSY1 372 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 AKR1B15C9JRZ8 316 aaPredicted RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 TRAFD1O14545 582 aaPredicted RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 SCAMP1O15126 338 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 FFAR2O15552 330 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 MFAP3LO75121 409 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 RFPL3O75679 317 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 PEX11BO96011 259 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 GHRHP01286 108 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 PRKCGP05129 697 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 KRT7P08729 469 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 CD48P09326 243 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 TMEM253P0C7T8 217 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 GIMD1P0DJR0 217 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 C6P13671 934 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 NME1P15531 152 aaKnown RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 ACP1P24666 158 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 IGFALSP35858 605 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 GJC1P36383 396 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 HSPA9P38646 679 aaKnown RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 ARHGAP25P42331 645 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ACADVLP49748 655 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 LIG3P49916 1009 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 PEX5P50542 639 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ARSEP51690 589 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 TAS2R40P59535 323 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 AP1S1P61966 158 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 E2F1Q01094 437 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 SEMG2Q02383 582 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 EIF2B5Q13144 721 aaKnown RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 ILKQ13418 452 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 PWP1Q13610 501 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 DPYSL3Q14195 570 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ZNF235Q14590 738 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 MESDQ14696 234 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 PDK2Q15119 407 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 WSCD2Q2TBF2 565 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ANKRD20A8PQ5CZ79 823 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 TPRG1LQ5T0D9 272 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ZFYVE27Q5T4F4 411 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ZNF468Q5VIY5 522 aaPredicted RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 KDM7AQ6ZMT4 941 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 PARGQ86W56 976 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ZSWIM9Q86XI8 627 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 MARCH9Q86YJ5 346 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 CPNE8Q86YQ8 564 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 RELL1Q8IUW5 271 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 CNGA4Q8IV77 575 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ATPAF2Q8N5M1 289 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 TP53I13Q8NBR0 393 aaPredicted RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 OR4C6Q8NH72 309 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 PCDH19Q8TAB3 1148 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ZCCHC14Q8WYQ9 949 aaKnown RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 ECHDC3Q96DC8 303 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 NSMCE3Q96MG7 304 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 NUDCD1Q96RS6 583 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 DUSP23Q9BVJ7 150 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 TRIM5Q9C035 493 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 CAAP1Q9H8G2 361 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 SPTLC3Q9NUV7 552 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 NLGN3Q9NZ94 848 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 ATP8A1Q9Y2Q0 1164 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 CSNK1G3Q9Y6M4 447 aa7.47□□□□□ -1.21
NUP88-205ENST00000572809 TP53BP1Q12888 1972 aaPredicted RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 COL5A1P20908 1838 aaPredicted RBP7.47□□□□□ -1.21
NUP88-205ENST00000572809 FAM149AA5PLN7 773 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 TRABD2BA6NFA1 517 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 A8MX80 341 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 K7ESM1 405 aa7.46□□□□□ -1.22
NUP88-205ENST00000572809 MATN3O15232 486 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms