RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 RAPGEF5Q92565 580 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 SCAMP4Q969E2 229 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 ABCG8Q9H221 673 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 SLC17A4Q9Y2C5 497 aa18.09■□□□□ 0.49
CHD3-214ENST00000572579 PCYT1BQ9Y5K3 369 aaPredicted RBP18.09■□□□□ 0.49
CHD3-214ENST00000572579 CCDC187A0A096LP49 1063 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 A0A1W2PQ67 120 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 B4DGG1 531 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 MATN3O15232 486 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 GLB1P16278 677 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 RBMS1P29558 406 aaKnown RBP18.08■□□□□ 0.48
CHD3-214ENST00000572579 GJC1P36383 396 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 SSR1P43307 286 aaKnown RBP18.08■□□□□ 0.48
CHD3-214ENST00000572579 MAZP56270 477 aaKnown RBP18.08■□□□□ 0.48
CHD3-214ENST00000572579 ZSCAN23Q3MJ62 389 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 C14orf28Q4W4Y0 310 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 ARHGAP40Q5TG30 622 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 SPRED1Q7Z699 444 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 CCNJLQ8IV13 435 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 PATE1Q8WXA2 126 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 LIN37Q96GY3 246 aaPredicted RBP18.08■□□□□ 0.48
CHD3-214ENST00000572579 GFM1Q96RP9 751 aaKnown RBP18.08■□□□□ 0.48
CHD3-214ENST00000572579 DPEP2Q9H4A9 486 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 SUDS3Q9H7L9 328 aaPredicted RBP18.08■□□□□ 0.48
CHD3-214ENST00000572579 CARS2Q9HA77 564 aaKnown RBP18.08■□□□□ 0.48
CHD3-214ENST00000572579 RBM22Q9NW64 420 aaKnown RBP eCLIP18.08■□□□□ 0.48
CHD3-214ENST00000572579 LRIT1Q9P2V4 623 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 CD84Q9UIB8 345 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 MOSPD1Q9UJG1 213 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 SUFUQ9UMX1 484 aa18.08■□□□□ 0.48
CHD3-214ENST00000572579 AGRPO00253 132 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 PLD2O14939 933 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 CCNB1P14635 433 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 KELP23276 732 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 TEAD1P28347 426 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 SERPINB6P35237 376 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 UGT1A5P35504 534 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 DPTQ07507 201 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 CLN3Q13286 438 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 LRRC66Q68CR7 880 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 TRIM74Q86UV6 250 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 LRRC49Q8IUZ0 686 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 KCTD6Q8NC69 237 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 SNRNP27Q8WVK2 155 aaKnown RBP18.07■□□□□ 0.48
CHD3-214ENST00000572579 SCARF2Q96GP6 870 aaPredicted RBP18.07■□□□□ 0.48
CHD3-214ENST00000572579 TSGA13Q96PP4 275 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 WDR24Q96S15 920 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 DPH1Q9BZG8 443 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 EPB41L5Q9HCM4 733 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 TAAR2Q9P1P5 351 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 CTTNBP2NLQ9P2B4 639 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 CHKBQ9Y259 395 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 TMEM98Q9Y2Y6 226 aa18.07■□□□□ 0.48
CHD3-214ENST00000572579 AHCTF1Q8WYP5 2266 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 A0A0J9YYE9 177 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 TEX51A0A1B0GUA7 166 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 C3orf70A6NLC5 250 aaPredicted RBP18.06■□□□□ 0.48
CHD3-214ENST00000572579 PSMD11O00231 422 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 TRBC1P01850 177 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 HLA-DQB2P05538 268 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 MMP2P08253 660 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 CYP2A6P11509 494 aaPredicted RBP18.06■□□□□ 0.48
CHD3-214ENST00000572579 PNLIPP16233 465 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 CCKBRP32239 447 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 GNPDA1P46926 289 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 INHBCP55103 352 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 TPM4P67936 248 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 SRSF6Q13247 344 aaKnown RBP18.06■□□□□ 0.48
CHD3-214ENST00000572579 SLC18A3Q16572 532 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 ZNF574Q6ZN55 896 aaPredicted RBP18.06■□□□□ 0.48
CHD3-214ENST00000572579 RAB11FIP2Q7L804 512 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 BBS5Q8N3I7 341 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 CNTD1Q8N815 330 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 NSMCE1Q8WV22 266 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 FATE1Q969F0 183 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 IQCDQ96DY2 449 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 DNAJC7Q99615 494 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 CHP1Q99653 195 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 ZNF670Q9BS34 389 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 SEMA6CQ9H3T2 930 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 PHPT1Q9NRX4 125 aaPredicted RBP18.06■□□□□ 0.48
CHD3-214ENST00000572579 CNOT6Q9ULM6 557 aaKnown RBP18.06■□□□□ 0.48
CHD3-214ENST00000572579 ANKRD36A6QL64 1941 aa18.06■□□□□ 0.48
CHD3-214ENST00000572579 GOLGA6L19H0YKK7 550 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 TK2O00142 265 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 NUDT21O43809 227 aaKnown RBP18.05■□□□□ 0.48
CHD3-214ENST00000572579 ECEL1O95672 775 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 ITGA2BP08514 1039 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 ITIH1P19827 911 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 CCNCP24863 283 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 SLC5A2P31639 672 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 ADCY8P40145 1251 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 ETV5P41161 510 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 STC1P52823 247 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 OR1D5P58170 312 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 CTBSQ01459 385 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 ITKQ08881 620 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 PDK2Q15119 407 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 TGIF1Q15583 401 aa18.05■□□□□ 0.48
CHD3-214ENST00000572579 HADHQ16836 314 aaKnown RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms