RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 CCDC25Q86WR0 208 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 NRSN1Q8IZ57 195 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 TTC30BQ8N4P2 665 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 PRSS33Q8NF86 280 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 OR4K2Q8NGD2 314 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 PTCD2Q8WV60 388 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 ART4Q93070 314 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 AP2M1Q96CW1 435 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 STAMBPL1Q96FJ0 436 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 DTD2Q96FN9 168 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 SERAC1Q96JX3 654 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 COQ10AQ96MF6 247 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 PWWP2AQ96N64 755 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 RANBP9Q96S59 729 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 C1QTNF2Q9BXJ5 285 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 FAM129AQ9BZQ8 928 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 FAM83DQ9H4H8 585 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 FZD3Q9NPG1 666 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 AASDHPPTQ9NRN7 309 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 GRHL1Q9NZI5 618 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 EIF2B4Q9UI10 523 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 TTC28Q96AY4 2481 aa9.43□□□□□ -0.9
NPLOC4-208ENST00000572351 ATXN2Q99700 1313 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 GLYATL1P3A0A0U1RQE8 302 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 MAGEB16A2A368 324 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 LATO43561 262 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 LDB2O43679 373 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 LILRB5O75023 590 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 PYGLP06737 847 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 BPIP17213 487 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 PGAM1P18669 254 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 PAMP19021 973 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 MAOBP27338 520 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 SPAM1P38567 509 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 HADHAP40939 763 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 GPR1P46091 355 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 CREB5Q02930 508 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 TCF15Q12870 199 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 PDIA2Q13087 525 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 PTPRCAPQ14761 206 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 HP1BP3Q5SSJ5 553 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 FNBP1LQ5T0N5 605 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 RAET1GQ6H3X3 334 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 ZDHHC24Q6UX98 284 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 FAM151BQ6UXP7 276 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 RFLNAQ6ZTI6 216 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 CEP128Q6ZU80 1094 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 CYP2U1Q7Z449 544 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 SLC41A1Q8IVJ1 513 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 RAVER1Q8IY67 606 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 ZBED8Q8IZ13 594 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 OTUD6BQ8N6M0 293 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 GPR161Q8N6U8 529 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 DENND6BQ8NEG7 585 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 OR13C4Q8NGS5 318 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 FBXO25Q8TCJ0 367 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 STYXQ8WUJ0 223 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 ASB12Q8WXK4 309 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 SEC14L1Q92503 715 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 PIGKQ92643 395 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 CFAP36Q96G28 342 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 DNAJC1Q96KC8 554 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 SLC6A18Q96N87 628 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 RIOK2Q9BVS4 552 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 CDH19Q9H159 772 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 KCNH6Q9H252 994 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 GDF3Q9NR23 364 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 CHRAC1Q9NRG0 131 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 IL17CQ9P0M4 197 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 APPL1Q9UKG1 709 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 KCTD3Q9Y597 815 aa9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 V9GYY5 206 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-208ENST00000572351 CHD5Q8TDI0 1954 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 MUC3AQ02505 3323 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 MROH6A6NGR9 719 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 CCL22O00626 93 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 RAD51BO15315 384 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 BANF1O75531 89 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 PRAMEF1O95521 474 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 POLBP06746 335 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ITGALP20701 1170 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ITPKAP23677 461 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 MC4RP32245 332 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ELK3P41970 407 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 DPP6P42658 865 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 MAGEA3P43357 314 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 CARSP49589 748 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ZNF140P52738 457 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 CLDN2P57739 230 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 PRAMEP78395 509 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 MSLNQ13421 630 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 FGL2Q14314 439 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 IRF4Q15306 451 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 TEAD4Q15561 434 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 WSCD2Q2TBF2 565 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 MSS51Q4VC12 460 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 TSTD2Q5T7W7 516 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ARMC3Q5W041 872 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms