RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 NRBF2Q96F24 287 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 SP110Q9HB58 689 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 FAIMQ9NVQ4 179 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 SUN2Q9UH99 717 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 OAZ3Q9UMX2 235 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 UBFD1O14562 309 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 FGF4P08620 206 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 SLC2A3P11169 496 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 HGFP14210 728 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CD86P42081 329 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 SLC36A3Q495N2 470 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 MARC1Q5VT66 337 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 KDELC1Q6UW63 502 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 BHLHA9Q7RTU4 235 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 SCML4Q8N228 414 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 OR52K2Q8NGK3 314 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 ADAMTS16Q8TE57 1224 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 TINF2Q9BSI4 451 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 PAIP1Q9H074 479 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CCDC68Q9H2F9 335 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 FNIP2Q9P278 1114 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 GMPR2Q9P2T1 348 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 SBF1O95248 1867 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 MATN4O95460 622 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 GNAO1P09471 354 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 HOXC13P31276 330 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 GPR107Q5VW38 600 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 TSPEARQ8WU66 669 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 VPS50Q96JG6 964 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 C3orf30Q96M34 536 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 GAD1Q99259 594 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CSNK1G1Q9HCP0 422 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 TMEM30AQ9NV96 361 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 MAP10Q9P2G4 905 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CRYL1Q9Y2S2 319 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 DNAJC15Q9Y5T4 150 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CDK14O94921 469 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 GLP2RO95838 553 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 ALBP02768 609 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 UGT1A6P19224 532 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CAPN3P20807 821 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 RPS9P46781 194 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 PSEN2P49810 448 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CCT8P50990 548 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 TNK2Q07912 1038 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 PFKFB4Q16877 469 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 SPATA19Q7Z5L4 167 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 ADGRG5Q8IZF4 528 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 LEMD2Q8NC56 503 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 DDHD1Q8NEL9 900 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 PNPT1Q8TCS8 783 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 PABPC5Q96DU9 382 aaKnown RBP10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CDCA5Q96FF9 252 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CMTM6Q9NX76 183 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CACNG4Q9UBN1 327 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 SFMBT1Q9UHJ3 866 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 CDH7Q9ULB5 785 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 ZNF711Q9Y462 761 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 TSC2P49815 1807 aa10.75□□□□□ -0.69
CCDC40-207ENST00000572253 EI24O14681 340 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 S1PR4O95977 384 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 EEF1B2P24534 225 aaKnown RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 CLCNKBP51801 687 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 CDKN2DP55273 166 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SFSWAPQ12872 951 aaKnown RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SLC44A4Q53GD3 710 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 C16orf87Q6PH81 154 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SPRED1Q7Z699 444 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 TRIM74Q86UV6 250 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 TRIM73Q86UV7 250 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 CMTR2Q8IYT2 770 aaKnown RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 DCP1BQ8IZD4 617 aaKnown RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 GIPC3Q8TF64 312 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 IMP4Q96G21 291 aaKnown RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 NPLQ9BXD5 320 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 ALG2Q9H553 416 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 HEMK1Q9Y5R4 338 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SUPT3HB4E1H0 165 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 E9PAM4 449 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 TREHO43280 583 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SUPT3HO75486 399 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SLC6A2P23975 617 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 CASP2P42575 452 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SLC5A3P53794 718 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 C21orf59P57076 290 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SH3BP2P78314 561 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 MAPRE1Q15691 268 aaKnown RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 LDB1Q86U70 411 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 EPHX4Q8IUS5 362 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 MAGEE2Q8TD90 523 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 BDH2Q9BUT1 245 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SDR39U1Q9NRG7 319 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 INTS10Q9NVR2 710 aaKnown RBP10.74□□□□□ -0.69
CCDC40-207ENST00000572253 TMEM9Q9P0T7 183 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 CDC14AQ9UNH5 594 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 SH3GLB1Q9Y371 365 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 CROCCQ5TZA2 2017 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 GMNNO75496 209 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 CD1DP15813 335 aa10.74□□□□□ -0.69
CCDC40-207ENST00000572253 MAP4P27816 1152 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms