RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PLPP6Q8IY26 295 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 IFT20Q8IY31 132 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 LSMEM2Q8N112 164 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 PCDH20Q8N6Y1 951 aaKnown RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 DCBLD1Q8N8Z6 715 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 ART4Q93070 314 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 EXOC2Q96KP1 924 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 NUDCD1Q96RS6 583 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 RSPH9Q9H1X1 276 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 NOD2Q9HC29 1040 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 EIF2B3Q9NR50 452 aaKnown RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 FAM114A2Q9NRY5 505 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 CLCA2Q9UQC9 943 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TTLL3Q9Y4R7 772 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TMEM131Q92545 1883 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 COL6A6A6NMZ7 2263 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TTC34A8MYJ7 566 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 RNASEH1O60930 286 aaKnown RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 ANXA9O76027 345 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 NEBLO76041 1014 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TMEM63AO94886 807 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 AP2A1O95782 977 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 GSRP00390 522 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TPSB2P20231 275 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 CES1P23141 567 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 EPHA8P29322 1005 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 ITGA8P53708 1063 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TMPRSS3P57727 454 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 VSNL1P62760 191 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 BASP1P80723 227 aaKnown RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 MORF4L2Q15014 288 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 SHBQ15464 509 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TPSAB1Q15661 275 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 SLC14A2Q15849 920 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 RALGPS1Q5JS13 557 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 ATXN7L2Q5T6C5 722 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 BROXQ5VW32 411 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 KDELC1Q6UW63 502 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 PCGF5Q86SE9 256 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 HOOK3Q86VS8 718 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 EID2Q8N6I1 236 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 EIF1ADQ8N9N8 165 aaKnown RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 OR2AP1Q8NGE2 309 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 ZNF578Q96N58 590 aaPredicted RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 PPP1R2P1Q96PQ5 205 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 RBM15Q96T37 977 aaKnown RBP eCLIP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 SEMA3CQ99985 751 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 NEUROG2Q9H2A3 272 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 TNKS2Q9H2K2 1166 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 PABPC3Q9H361 631 aaKnown RBP13.81□□□□□ -0.2
RPAIN-209ENST00000571558 HAUS2Q9NVX0 235 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 RAB21Q9UL25 225 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 FZD4Q9ULV1 537 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 SHOC2Q9UQ13 582 aa13.81□□□□□ -0.2
RPAIN-209ENST00000571558 B8ZZF3 427 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 INSIG1O15503 277 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 SUN1O94901 812 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 MT-CYBP00156 380 aaPredicted RBP13.8□□□□□ -0.2
RPAIN-209ENST00000571558 MYBL2P10244 700 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 ACP1P24666 158 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 ADRA1AP35348 466 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 CD86P42081 329 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 CCR5P51681 352 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 CDK16Q00536 496 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 CUL1Q13616 776 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 NCEH1Q6PIU2 408 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 Q6ZVU0 165 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.8□□□□□ -0.2
RPAIN-209ENST00000571558 BBOF1Q8ND07 529 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 OR2A12Q8NGT7 310 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 OR2T34Q8NGX1 318 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 FBXO25Q8TCJ0 367 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 SNRNP27Q8WVK2 155 aaKnown RBP13.8□□□□□ -0.2
RPAIN-209ENST00000571558 MRGPRX2Q96LB1 330 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 SLC6A18Q96N87 628 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 PARD6BQ9BYG5 372 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 FAM129AQ9BZQ8 928 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 TM6SF2Q9BZW4 377 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 FBXL12Q9NXK8 326 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 UBP1Q9NZI7 540 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 ANAPC5Q9UJX4 755 aa13.8□□□□□ -0.2
RPAIN-209ENST00000571558 AAR2Q9Y312 384 aaKnown RBP13.8□□□□□ -0.2
RPAIN-209ENST00000571558 NUMA1Q14980 2115 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 ERI2A8K979 691 aaKnown RBP13.79□□□□□ -0.2
RPAIN-209ENST00000571558 C10orf142B7Z368 130 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 TLR4O00206 839 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 MAGEC1O60732 1142 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 APRTP07741 180 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 C6P13671 934 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 SCNN1BP51168 640 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 TERF1P54274 439 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 GEMP55040 296 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 PCBP4P57723 403 aaKnown RBP13.79□□□□□ -0.2
RPAIN-209ENST00000571558 ST8SIA6P61647 398 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 AP1S1P61966 158 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 CAV1Q03135 178 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 KCNC4Q03721 635 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 ITKQ08881 620 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 OVGP1Q12889 678 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms