RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 MAPK9P45984 424 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 GPR3P46089 330 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SEPHS1P49903 392 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 PGDP52209 483 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SNRPD1P62314 119 aaKnown RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 DNASE1L3Q13609 305 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 IHHQ14623 411 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 KCNAB1Q14722 419 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 CNGA3Q16281 694 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 EFHC1Q5JVL4 640 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 MIIPQ5JXC2 388 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 BRMS1LQ5PSV4 323 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 PRAMEF17Q5VTA0 474 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 AFMIDQ63HM1 303 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SP5Q6BEB4 398 aaPredicted RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 ISM2Q6H9L7 571 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 ZNF783Q6ZMS7 281 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 KRBA2Q6ZNG9 492 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 ARHGAP36Q6ZRI8 547 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 MARK2Q7KZI7 788 aaKnown RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 TSPAN33Q86UF1 283 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SLC47A2Q86VL8 602 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 ZSCAN30Q86W11 494 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 ZNF295-AS1Q8N0V1 137 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SLC38A9Q8NBW4 561 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 ADAMTS17Q8TE56 1095 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 NCSTNQ92542 709 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 PGAP3Q96FM1 320 aaPredicted RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 GDAP1L1Q96MZ0 367 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 ZNF396Q96N95 335 aaPredicted RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 PPP1R9BQ96SB3 815 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 CRACR2AQ9BSW2 395 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SLC25A23Q9BV35 468 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 OSBPL1AQ9BXW6 950 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 TEX101Q9BY14 249 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SUV39H2Q9H5I1 410 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SIX2Q9NPC8 291 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 UBE2TQ9NPD8 197 aaPredicted RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.17□□□□□ -1.26
SMG6-205ENST00000570659 AKAP7Q9P0M2 348 aaPredicted RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 SCHIP1Q9P0W5 487 aaPredicted RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 MAP10Q9P2G4 905 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 B4GALT6Q9UBX8 382 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 ARMCX3Q9UH62 379 aaPredicted RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 TMEM59LQ9UK28 342 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SLC5A6Q9Y289 635 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 SVILO95425 2214 aa7.17□□□□□ -1.26
SMG6-205ENST00000570659 ANKHD1Q8IWZ3 2542 aaKnown RBP7.17□□□□□ -1.26
SMG6-205ENST00000570659 FER1L5A0AVI2 2057 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 FAM237AA0A1B0GTK4 181 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ZSCAN5CA6NGD5 496 aaPredicted RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 A6NL46 340 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 GOLGA8SH3BPF8 625 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 CACNB4O00305 520 aaPredicted RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 TRAFD1O14545 582 aaPredicted RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 POLR1CO15160 346 aaPredicted RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 DDX3YO15523 660 aaKnown RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 STX10O60499 249 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 F13A1P00488 732 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 HOXC4P09017 264 aaPredicted RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 MYCLP1P12525 358 aaPredicted RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 CMA1P23946 247 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 CLCN1P35523 988 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ACTR1BP42025 376 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 STAT1P42224 750 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ITGA1P56199 1179 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 RAB15P59190 212 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ACTR1AP61163 376 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 RHOAP61586 193 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ATP11AP98196 1134 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 CDK3Q00526 305 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 SRSF11Q05519 484 aaKnown RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 FOXM1Q08050 763 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 CDSNQ15517 529 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ANO6Q4KMQ2 910 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 FAM182AQ5T1J6 154 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 RWDD4Q6NW29 188 aaKnown RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 DUS1LQ6P1R4 473 aaKnown RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 C6orf15Q6UXA7 325 aaPredicted RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 CEACAM20Q6UY09 585 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 CBARPQ8N350 705 aaPredicted RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 SFRP1Q8N474 314 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ESX1Q8N693 406 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 TSEN2Q8NCE0 465 aaKnown RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 JOSD2Q8TAC2 188 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 KIAA1524Q8TCG1 905 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 GPT2Q8TD30 523 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ECHDC3Q96DC8 303 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ARHGEF26Q96DR7 871 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 SCARF2Q96GP6 870 aaPredicted RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 C5orf34Q96MH7 638 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 OR6C1Q96RD1 312 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 BARD1Q99728 777 aaKnown RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 C1QTNF7Q9BXJ2 289 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 WDR26Q9H7D7 661 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 TMEM248Q9NWD8 314 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 PPARGC1AQ9UBK2 798 aaKnown RBP7.16□□□□□ -1.26
SMG6-205ENST00000570659 TBC1D29Q9UFV1 150 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 CD84Q9UIB8 345 aa7.16□□□□□ -1.26
SMG6-205ENST00000570659 ENTPD4Q9Y227 616 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms