RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 CPP00450 1065 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 FGF1P05230 155 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 HOXC4P09017 264 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 FAM87AP0C7U9 286 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 LIPCP11150 499 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 CCNB1P14635 433 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 LHCGRP22888 699 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 VIPR1P32241 457 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 ARL4AP40617 200 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 PPM1FP49593 454 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 CDK3Q00526 305 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 CTBSQ01459 385 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 TYRO3Q06418 890 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 KLHL30Q0D2K2 578 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 ILF3Q12906 894 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 ANO6Q4KMQ2 910 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 TMCO3Q6UWJ1 677 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZNF574Q6ZN55 896 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 MARK2Q7KZI7 788 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 TRIM74Q86UV6 250 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 PIM3Q86V86 326 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 KIAA1524Q8TCG1 905 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 GPBAR1Q8TDU6 330 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 LRRN4Q8WUT4 740 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 PMEPA1Q969W9 287 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 DTD2Q96FN9 168 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 BTBD6Q96KE9 485 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 NUDCD1Q96RS6 583 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 EIF3CQ99613 913 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 TEX101Q9BY14 249 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 RTN4Q9NQC3 1192 aaKnown RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 PHPT1Q9NRX4 125 aaPredicted RBP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 PCDHB11Q9Y5F2 797 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 ST14Q9Y5Y6 855 aa8.6□□□□□ -1.03
CTDNEP1-203ENST00000570385 SDK2Q58EX2 2172 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 IGHV5-10-1A0A0J9YXX1 117 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 CYSRT1A8MQ03 144 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 PPM1DO15297 605 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 MAFKO60675 156 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 SOCS5O75159 536 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 PGLSO95336 258 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 MAP3K6O95382 1288 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 CPNE6O95741 557 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 PDHA1P08559 390 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 RARAP10276 462 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 PNLIPP16233 465 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 CR2P20023 1033 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 CD1CP29017 333 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 ADCY8P40145 1251 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 SSR1P43307 286 aaKnown RBP8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 MMP13P45452 471 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 GPR1P46091 355 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 HCAR3P49019 387 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 ITKQ08881 620 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 MMRN1Q13201 1228 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 TSR1Q2NL82 804 aaKnown RBP8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 FAM182AQ5T1J6 154 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 POLNQ7Z5Q5 900 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 NAGSQ8N159 534 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 ATPAF2Q8N5M1 289 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 LZTR1Q8N653 840 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 SCAMP4Q969E2 229 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 CCDC74BQ96LY2 380 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZNF599Q96NL3 588 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 NAP1L5Q96NT1 182 aaPredicted RBP8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 GBP4Q96PP9 640 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 CSPG4P5Q96PW8 444 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 AGAP2Q99490 1192 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 SEMA3CQ99985 751 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 MGME1Q9BQP7 344 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 GSDMCQ9BYG8 508 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 FRMD8Q9BZ67 464 aaPredicted RBP8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 FAM117AQ9C073 453 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 NT5MQ9NPB1 228 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 TMEM9Q9P0T7 183 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 SEPT10Q9P0V9 454 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 PHTF1Q9UMS5 762 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 PRKAB1Q9Y478 270 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 HEMK1Q9Y5R4 338 aaPredicted RBP8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 TENM4Q6N022 2769 aa8.59□□□□□ -1.03
CTDNEP1-203ENST00000570385 A8MU76 341 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 INPP4BO15327 924 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 CD48P09326 243 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 FGF3P11487 239 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 CYP2A6P11509 494 aaPredicted RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 GZMAP12544 262 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 CSF2RBP32927 897 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 PCK1P35558 622 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 GJC1P36383 396 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 HSPA9P38646 679 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 ANP32AP39687 249 aaKnown RBP8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 ACTR1BP42025 376 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 ARSDP51689 593 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 ACTR1AP61163 376 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 KCNC4Q03721 635 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 KRT81Q14533 505 aa8.58□□□□□ -1.04
CTDNEP1-203ENST00000570385 IHHQ14623 411 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms