RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 NOP2P46087 812 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 POLD2P49005 469 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 ACTR1AP61163 376 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 PNOCQ13519 176 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 NR6A1Q15406 480 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 PAPD7Q5XG87 772 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 AFMIDQ63HM1 303 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 CPZQ66K79 652 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 JMJD6Q6NYC1 403 aaPredicted RBP10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 LYSMD3Q7Z3D4 306 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 PHLDB2Q86SQ0 1253 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLC47A2Q86VL8 602 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZC3H18Q86VM9 953 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZNF354CQ86Y25 554 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 DNAAF5Q86Y56 855 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 TTC13Q8NBP0 860 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLC37A2Q8TED4 501 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 NCSTNQ92542 709 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 C19orf60Q96EN9 201 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 CEP63Q96MT8 703 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZNF641Q96N77 438 aaPredicted RBP10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 TEX101Q9BY14 249 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 GOLPH3LQ9H4A5 285 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 PHPT1Q9NRX4 125 aaPredicted RBP10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 SIDT1Q9NXL6 827 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 MAP10Q9P2G4 905 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 KLHL3Q9UH77 587 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 PCDHGA9Q9Y5G4 932 aaKnown RBP10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 PCDHGA6Q9Y5G7 932 aa10.41□□□□□ -0.74
CTDNEP1-202ENST00000570380 ARHGAP10A1A4S6 786 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 A6NCN8 305 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 A8MX80 341 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 KRT86O43790 486 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZNF202O95125 648 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 CBX6O95503 412 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 EML2O95834 649 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 ADRA1BP35368 520 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 SCNN1AP37088 669 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 GABRB2P47870 512 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 LEPRP48357 1165 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 APBA1Q02410 837 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 CHAF1BQ13112 559 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 PEX6Q13608 980 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 PKP1Q13835 747 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 GRM3Q14832 879 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 ACOX1Q15067 660 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 CFAP58Q5T655 872 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 FAM102AQ5T9C2 384 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 ENOSF1Q7L5Y1 443 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 XYLT1Q86Y38 959 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 MFRPQ9BY79 579 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 UNKQ9C0B0 810 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 SCAND2PQ9GZW5 306 aaPredicted RBP10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLAMF7Q9NQ25 335 aa10.4□□□□□ -0.74
CTDNEP1-202ENST00000570380 POLEQ07864 2286 aa10.4□□□□□ -0.75
CTDNEP1-202ENST00000570380 FAM170AA1A519 330 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 K7ELQ4 463 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 KIAA0754O94854 1291 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 ERCC5P28715 1186 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 KRT9P35527 623 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 RGRP47804 291 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 CCL11P51671 97 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 ATP11AP98196 1134 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 CDK3Q00526 305 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 PTK2Q05397 1052 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 FOXM1Q08050 763 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 DNASE1L3Q13609 305 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 NAA30Q147X3 362 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 C2CD6Q53TS8 623 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 DPPA4Q7L190 304 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 TRIM59Q8IWR1 403 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 SFRP1Q8N474 314 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 SHC3Q92529 594 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 C18orf8Q96DM3 657 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 TBC1D31Q96DN5 1066 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 STAMBPL1Q96FJ0 436 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 SCARF2Q96GP6 870 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 COQ10AQ96MF6 247 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 RMND1Q9NWS8 449 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 TMEM59LQ9UK28 342 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 SLC17A4Q9Y2C5 497 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
CTDNEP1-202ENST00000570380 SVILO95425 2214 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 GOLGA8SH3BPF8 625 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 NDUFA10O95299 355 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 MAP3K6O95382 1288 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 IVLP07476 585 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 PLEKP08567 350 aaPredicted RBP10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 NFKBIAP25963 317 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 VARSP26640 1264 aaKnown RBP10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 CASP14P31944 242 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 CLCN1P35523 988 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 NDST2P52849 883 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 MARSP56192 900 aaKnown RBP10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 NFATC2Q13469 925 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 ZRANB3Q5FWF4 1079 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 SLC6A19Q695T7 634 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 TRIM65Q6PJ69 517 aa10.38□□□□□ -0.75
CTDNEP1-202ENST00000570380 RBMXL3Q8N7X1 1067 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms