RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 UAP1L1Q3KQV9 507 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 RINT1Q6NUQ1 792 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 TTC23LQ6PF05 361 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 SFR1Q86XK3 245 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 PDCD6IPQ8WUM4 868 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 HES6Q96HZ4 224 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 HEXIM2Q96MH2 286 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 C16orf70Q9BSU1 422 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 FAM192AQ9GZU8 254 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 IFT22Q9H7X7 185 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 SLC35C2Q9NQQ7 365 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 KLK14Q9P0G3 267 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 SH3GLB1Q9Y371 365 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 MYADML2A6NDP7 307 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 OPHN1O60890 802 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 C22orf31O95567 290 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 CER1O95813 267 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 CCNE2O96020 404 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 NMT1P30419 496 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 SLC8A1P32418 973 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 RNF4P78317 190 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 SLC12A1Q13621 1099 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 RNF43Q68DV7 783 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 PGBD2Q6P3X8 592 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 WDR49Q8IV35 697 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.68□□□□□ -1.347e-6■■■■■ 27.5
SMG1-217ENST00000569764 OMA1Q96E52 524 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 CITED2Q99967 270 aaPredicted RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 B3GNT5Q9BYG0 378 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 DMAP1Q9NPF5 467 aaPredicted RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 LZTFL1Q9NQ48 299 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 DUS2Q9NX74 493 aaKnown RBP6.68□□□□□ -1.34
SMG1-217ENST00000569764 KLHL9Q9P2J3 617 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 CA14Q9ULX7 337 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 DTNAQ9Y4J8 743 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 CDY1Q9Y6F8 540 aa6.68□□□□□ -1.34
SMG1-217ENST00000569764 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 LOC100506127A0A0U1RQW1 187 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 C1orf232A0A0U1RR37 186 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 PMS2P1A4D2B8 440 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 GRM6O15303 877 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 CCL16O15467 120 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 SEC22BO75396 215 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 MMP2P08253 660 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 CFHP08603 1231 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 NR2F2P24468 414 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 LUMP51884 338 aaPredicted RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 EEF1A1P68104 462 aaKnown RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 GCNT1Q02742 428 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 EEF1A2Q05639 463 aaKnown RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 ZNF177Q13360 481 aaPredicted RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 MAPRE2Q15555 327 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 EEF1A1P5Q5VTE0 462 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 TRAT1Q6PIZ9 186 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 C1orf186Q6ZWK4 172 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 FAM228AQ86W67 206 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 CLVS1Q8IUQ0 354 aaPredicted RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 GUF1Q8N442 669 aaKnown RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 DTX3Q8N9I9 347 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 FAM13CQ8NE31 585 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 OR14C36Q8NHC7 312 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 RAB7BQ96AH8 199 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 CHFRQ96EP1 664 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 SENP8Q96LD8 212 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 SYT15Q9BQS2 421 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 NT5C1AQ9BXI3 368 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 STK33Q9BYT3 514 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 ZCCHC2Q9C0B9 1178 aaKnown RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 RNF32Q9H0A6 362 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 HSFX1Q9UBD0 423 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 SLC22A14Q9Y267 594 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 ARID2Q68CP9 1835 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 C5orf67F2Z3F1 127 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 TGFB1I1O43294 461 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 GALR2O43603 387 aaPredicted RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 CYTIPO60759 359 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 CIB2O75838 187 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 AKAP3O75969 853 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 STAG3L3P0CL85 134 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 POLR2EP19388 210 aaKnown RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 CCR4P51679 360 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 NPEPPSP55786 919 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 ABATP80404 500 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 CDH18Q13634 790 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 USP10Q14694 798 aaKnown RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 ADIPOQQ15848 244 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 C10orf120Q5SQS8 335 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 SNX30Q5VWJ9 437 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 C16orf46Q6P387 395 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 TBC1D19Q8N5T2 526 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 MFSD2AQ8NA29 543 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 OR8K3Q8NH51 312 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 NKD1Q969G9 470 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 ABTB1Q969K4 478 aaPredicted RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 SNF8Q96H20 258 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 ZNF668Q96K58 619 aaPredicted RBP6.67□□□□□ -1.34
SMG1-217ENST00000569764 CCDC28BQ9BUN5 200 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 PCDHGA5Q9Y5G8 931 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 H0YJX3 145 aa6.67□□□□□ -1.34
SMG1-217ENST00000569764 ARHGAP6O43182 974 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms