RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 MCCC1Q96RQ3 725 aaPredicted RBP16.04■□□□□ 0.16
USB1-215ENST00000569252 LYSMD1Q96S90 227 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 SLC17A9Q9BYT1 436 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 CD93Q9NPY3 652 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 CASS4Q9NQ75 786 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 FAM114A2Q9NRY5 505 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 PKD2L2Q9NZM6 624 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 SAMD15Q9P1V8 674 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 ZMIZ1Q9ULJ6 1067 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 SHOC2Q9UQ13 582 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 ITM2BQ9Y287 266 aa16.04■□□□□ 0.16
USB1-215ENST00000569252 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 MAGEB16A2A368 324 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 IGLON5A6NGN9 336 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 NPIPB15A6NHN6 443 aaPredicted RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 PSMD11O00231 422 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 SEC31AO94979 1220 aaKnown RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 CLDN7O95471 211 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 SLC4A1P02730 911 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 PIRTP0C851 137 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 MLNP12872 115 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 MAT2AP31153 395 aaKnown RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 ITGA8P53708 1063 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 SHC2P98077 582 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 OLIG2Q13516 323 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 SEPT6Q14141 434 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 DNAJC21Q5F1R6 531 aaKnown RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 RNASEH2BQ5TBB1 312 aaKnown RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 LRRC66Q68CR7 880 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 DUPD1Q68J44 220 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 CASC4Q6P4E1 433 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 LIPIQ6XZB0 460 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 NLRP9Q7RTR0 991 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 TRIM69Q86WT6 500 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 IFT20Q8IY31 132 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 RAVER1Q8IY67 606 aaKnown RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 TMEFF1Q8IYR6 380 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 PDIK1LQ8N165 341 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 NAT8LQ8N9F0 302 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 PPHLN1Q8NEY8 458 aaKnown RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 IL22Q9GZX6 179 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 C6orf106Q9H6K1 298 aaPredicted RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 EPB41L5Q9HCM4 733 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 FSCN3Q9NQT6 498 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.03■□□□□ 0.16
USB1-215ENST00000569252 MBD1Q9UIS9 605 aaPredicted RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 ZNF711Q9Y462 761 aa16.03■□□□□ 0.16
USB1-215ENST00000569252 ASCC3Q8N3C0 2202 aaKnown RBP16.03■□□□□ 0.16
USB1-215ENST00000569252 TCRBV7S3A2A0A539 114 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 RGSL1A5PLK6 1076 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 SDR42E2A6NKP2 422 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 METTL12A8MUP2 240 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 WNT9AO14904 365 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 STX7O15400 261 aaKnown RBP16.02■□□□□ 0.16
USB1-215ENST00000569252 PAK4O96013 591 aaPredicted RBP16.02■□□□□ 0.16
USB1-215ENST00000569252 PROS1P07225 676 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 RHOXF2BP0C7M4 288 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 C6P13671 934 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 LPOP22079 712 aaPredicted RBP16.02■□□□□ 0.16
USB1-215ENST00000569252 ADRA1DP25100 572 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 RPL21P46778 160 aaKnown RBP16.02■□□□□ 0.16
USB1-215ENST00000569252 DHPSP49366 369 aaPredicted RBP16.02■□□□□ 0.16
USB1-215ENST00000569252 ARL4CP56559 192 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 PTSQ03393 145 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 POU6F1Q14863 301 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 TAF1AQ15573 450 aaPredicted RBP16.02■□□□□ 0.16
USB1-215ENST00000569252 SKIDA1Q1XH10 827 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 TEX35Q5T0J7 233 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 ANKRD22Q5VYY1 191 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 ZDHHC20Q5W0Z9 365 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 UNQ6494/PRO21346Q6UXR6 183 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 ARMCX6Q7L4S7 300 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 NRSN1Q8IZ57 195 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 IFT81Q8WYA0 676 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 LOXL4Q96JB6 756 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 ZC3H10Q96K80 434 aaKnown RBP16.02■□□□□ 0.16
USB1-215ENST00000569252 RHOXF2Q9BQY4 288 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 PIH1D1Q9NWS0 290 aaKnown RBP16.02■□□□□ 0.16
USB1-215ENST00000569252 GGT7Q9UJ14 662 aa16.02■□□□□ 0.16
USB1-215ENST00000569252 ATXN2Q99700 1313 aaKnown RBP16.01■□□□□ 0.15
USB1-215ENST00000569252 HEATR9A2RTY3 570 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 GOLGA8CPA6NN73 597 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 SLC31A1O15431 190 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 PPFIA2O75334 1257 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 GNSP15586 552 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 IVDP26440 423 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 AKT2P31751 481 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 GRIA1P42261 906 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 PLTPP55058 493 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 STAT4Q14765 748 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 CNGA3Q16281 694 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 UAP1L1Q3KQV9 507 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 PCID2Q5JVF3 399 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 CERCAMQ5T4B2 595 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 SEL1L3Q68CR1 1132 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 DENND5AQ6IQ26 1287 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 HIBCHQ6NVY1 386 aaPredicted RBP16.01■□□□□ 0.15
USB1-215ENST00000569252 CEP128Q6ZU80 1094 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 LYSMD3Q7Z3D4 306 aa16.01■□□□□ 0.15
USB1-215ENST00000569252 TMC3Q7Z5M5 1100 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms