RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 STC1P52823 247 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 PTSQ03393 145 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 OLIG2Q13516 323 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 AGERQ15109 404 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 SLC1A5Q15758 541 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 PPM1JQ5JR12 505 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 ESRP1Q6NXG1 681 aaKnown RBP12.79□□□□□ -0.36
CDT1-203ENST00000569140 DOK6Q6PKX4 331 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 MACC1Q6ZN28 852 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 GLT6D1Q7Z4J2 308 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 PRUNE1Q86TP1 453 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 HEATR4Q86WZ0 1026 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 HID1Q8IV36 788 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 C17orf53Q8N3J3 647 aaPredicted RBP12.79□□□□□ -0.36
CDT1-203ENST00000569140 ATL2Q8NHH9 583 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 RHBDD1Q8TEB9 315 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 SCAMP4Q969E2 229 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 OSBPL9Q96SU4 736 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 NAP1L3Q99457 506 aaPredicted RBP12.79□□□□□ -0.36
CDT1-203ENST00000569140 TBL1YQ9BQ87 522 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 GORASP1Q9BQQ3 440 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 RIOK2Q9BVS4 552 aaKnown RBP12.79□□□□□ -0.36
CDT1-203ENST00000569140 AP1M1Q9BXS5 423 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 ABCG8Q9H221 673 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 CAAP1Q9H8G2 361 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 MAGEE1Q9HCI5 957 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 PHPT1Q9NRX4 125 aaPredicted RBP12.79□□□□□ -0.36
CDT1-203ENST00000569140 KCTD5Q9NXV2 234 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 SMARCAL1Q9NZC9 954 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 KLQ9UEF7 1012 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 APOBEC3BQ9UH17 382 aaKnown RBP12.79□□□□□ -0.36
CDT1-203ENST00000569140 BTBD3Q9Y2F9 522 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 PCDHGB2Q9Y5G2 931 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 SPO11Q9Y5K1 396 aa12.79□□□□□ -0.36
CDT1-203ENST00000569140 LOC285095A0A1B0GVY8 99 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 PGRMC1O00264 195 aaKnown RBP12.78□□□□□ -0.36
CDT1-203ENST00000569140 INPP4BO15327 924 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 USP12O75317 370 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 GCATO75600 419 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 METTL18O95568 372 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 ATXN1LP0C7T5 689 aaKnown RBP12.78□□□□□ -0.36
CDT1-203ENST00000569140 ETS1P14921 441 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 KELP23276 732 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 STIP1P31948 543 aaKnown RBP12.78□□□□□ -0.36
CDT1-203ENST00000569140 GRK6P43250 576 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 HNRNPKP61978 463 aaKnown RBP eCLIP12.78□□□□□ -0.36
CDT1-203ENST00000569140 PPARDQ03181 441 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 SHBQ15464 509 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 SIX1Q15475 284 aaPredicted RBP12.78□□□□□ -0.36
CDT1-203ENST00000569140 OASLQ15646 514 aaKnown RBP12.78□□□□□ -0.36
CDT1-203ENST00000569140 CCNG2Q16589 344 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 PARP6Q2NL67 630 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 CCDC157Q569K6 752 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 TECPR1Q7Z6L1 1165 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 PHACTR4Q8IZ21 702 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 RBFAQ8N0V3 343 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 PELI3Q8N2H9 469 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 EID2Q8N6I1 236 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 LMX1AQ8TE12 382 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 COG1Q8WTW3 980 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 TSACCQ96A04 125 aaPredicted RBP12.78□□□□□ -0.36
CDT1-203ENST00000569140 FUBP1Q96AE4 644 aaKnown RBP12.78□□□□□ -0.36
CDT1-203ENST00000569140 CAPZA3Q96KX2 299 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 WDR92Q96MX6 357 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 LYSMD1Q96S90 227 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 SRPK1Q96SB4 655 aaKnown RBP12.78□□□□□ -0.36
CDT1-203ENST00000569140 SPATA16Q9BXB7 569 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 SLC13A1Q9BZW2 595 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 BPIFA1Q9NP55 256 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 SNX12Q9UMY4 172 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 DOLKQ9UPQ8 538 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 ZKSCAN5Q9Y2L8 839 aa12.78□□□□□ -0.36
CDT1-203ENST00000569140 PTPRZ1P23471 2315 aaPredicted RBP12.77□□□□□ -0.36
CDT1-203ENST00000569140 RIF1Q5UIP0 2472 aaKnown RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 GOLGA6L10A0A0M3HER8 536 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 SPAARA0A1B0GVQ0 90 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 GIPC1O14908 333 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 AURKAO14965 403 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 ZNF185O15231 689 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 BUD23O43709 281 aaKnown RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 PCDHGA12O60330 932 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 PIAS2O75928 621 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 RASGRP1O95267 797 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 KCNK5O95279 499 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 EPOP01588 193 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 ZSCAN5DPP0CG00 497 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 MYCLP1P12525 358 aaPredicted RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 CTSEP14091 401 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 NME1P15531 152 aaKnown RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 CSRP1P21291 193 aaKnown RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 KCNJ1P48048 391 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 RXRGP48443 463 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 SPINT3P49223 89 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 TERF1P54274 439 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 KIAA1024LP59773 190 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 SRP54P61011 504 aaKnown RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 CDK3Q00526 305 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 EIF2B5Q13144 721 aaKnown RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 PRRT3Q5FWE3 981 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 TRIM74Q86UV6 250 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms