RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	RNF25	Q96BH1	459 aa	Predicted RBP	11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	NUS1	Q96E22	293 aa		11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	CELF6	Q96J87	481 aa	Known RBP	11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	ZNF71	Q9NQZ8	489 aa	Predicted RBP	11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	KCTD5	Q9NXV2	234 aa		11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	TMEM9	Q9P0T7	183 aa		11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	B4GALT6	Q9UBX8	382 aa		11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	SUFU	Q9UMX1	484 aa		11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	SLC17A4	Q9Y2C5	497 aa		11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	CREBBP	Q92793	2442 aa		11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	MED13	Q9UHV7	2174 aa		11.37	□□□□□ -0.59
TCF4-238	ENST00000568169	EFCAB7	A8K855	629 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	DUX1	O43812	170 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	HEXIM1	O94992	359 aa	Known RBP	11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	CALB1	P05937	261 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	IVL	P07476	585 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	MPST	P25325	297 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	TEAD1	P28347	426 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	ERCC5	P28715	1186 aa	Predicted RBP	11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	ADCY8	P40145	1251 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	AP1S1	P61966	158 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	RPL7A	P62424	266 aa	Known RBP	11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	CDK3	Q00526	305 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	CDC20	Q12834	499 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	PEX6	Q13608	980 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	RFTN1	Q14699	578 aa	Predicted RBP	11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	CNGA3	Q16281	694 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	CLEC16A	Q2KHT3	1053 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	MON1B	Q7L1V2	547 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	ARHGAP12	Q8IWW6	846 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	FAM26E	Q8N5C1	309 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	PAF1	Q8N7H5	531 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	RTP4	Q96DX8	246 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	SCARF2	Q96GP6	870 aa	Predicted RBP	11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	ABHD17A	Q96GS6	310 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	TEFM	Q96QE5	360 aa	Known RBP	11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	CNPY3	Q9BT09	278 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	CINP	Q9BW66	212 aa	Predicted RBP	11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	KCNK4	Q9NYG8	393 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	BSN	Q9UPA5	3926 aa		11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.36	□□□□□ -0.59
TCF4-238	ENST00000568169	SHANK1	Q9Y566	2161 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	HIVEP3	Q5T1R4	2406 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	LOC101059948	A0A1B0GTJ6	334 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	EIF3CL	B5ME19	914 aa	Known RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	HTRA2	O43464	458 aa	Predicted RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	MAP4	P27816	1152 aa	Known RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	OAS2	P29728	719 aa	Known RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	VIPR1	P32241	457 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	FASLG	P48023	281 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	POLD2	P49005	469 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	SCNN1B	P51168	640 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	POLR2F	P61218	127 aa	Known RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	GPLD1	P80108	840 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	MC2R	Q01718	297 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	IL10RB	Q08334	325 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	DPCR1	Q3MIW9	517 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	TCP11X2	Q5H9J9	407 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	PPP1R15B	Q5SWA1	713 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	TIPARP	Q7Z3E1	657 aa	Known RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	ARHGAP22	Q7Z5H3	698 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	HSD11B1L	Q7Z5J1	315 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	FAM129C	Q86XR2	697 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	NRSN1	Q8IZ57	195 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	NLGN4X	Q8N0W4	816 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	APOBEC4	Q8WW27	367 aa	Known RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	DTD2	Q96FN9	168 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	MCEE	Q96PE7	176 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	PSKH2	Q96QS6	385 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	EIF3C	Q99613	913 aa	Known RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	EFHD1	Q9BUP0	239 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	VPS16	Q9H269	839 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	SP110	Q9HB58	689 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	NLRC4	Q9NPP4	1024 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	SAMSN1	Q9NSI8	373 aa	Known RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	GPATCH2L	Q9NWQ4	482 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	PLAA	Q9Y263	795 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	TEX15	Q9BXT5	2789 aa		11.35	□□□□□ -0.59
TCF4-238	ENST00000568169	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.34	□□□□□ -0.59
TCF4-238	ENST00000568169		A0A1W2PQ67	120 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	ANKRD62	A6NC57	917 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	PSMD11	O00231	422 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	EEF2K	O00418	725 aa	Known RBP	11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	EPHB6	O15197	1021 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	SOCS5	O75159	536 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	PRKAR1A	P10644	381 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	EEF1G	P26641	437 aa	Known RBP	11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	ETV3	P41162	512 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	ACTR1B	P42025	376 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	CD97	P48960	835 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	KLK7	P49862	253 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	RENBP	P51606	427 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	ACTR1A	P61163	376 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	OGDH	Q02218	1023 aa		11.34	□□□□□ -0.59
TCF4-238	ENST00000568169	ABHD18	Q0P651	414 aa		11.34	□□□□□ -0.59

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