RNA–Protein interactions for RNA: ENST00000566910.1

CPNE2-208, Transcript of copine 2, human

TSL 5

Gene CPNE2, Length 938 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE2-208	ENST00000566910	CCKBR	P32239	447 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	GJC1	P36383	396 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	SSR1	P43307	286 aa	Known RBP	13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	MMP13	P45452	471 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	OR1D5	P58170	312 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	ITK	Q08881	620 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	IQCB1	Q15051	598 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	AMZ1	Q400G9	498 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	ATP13A4	Q4VNC1	1196 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	BOLA3	Q53S33	107 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	PHF19	Q5T6S3	580 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	HGSNAT	Q68CP4	663 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	RAET1G	Q6H3X3	334 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	DOK6	Q6PKX4	331 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	SLC30A9	Q6PML9	568 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	GPBAR1	Q8TDU6	330 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	ZDHHC1	Q8WTX9	485 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	CPLX3	Q8WVH0	158 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	DTD2	Q96FN9	168 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	CCNL2	Q96S94	520 aa	Predicted RBP	13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	NUP85	Q9BW27	656 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	ANAPC7	Q9UJX3	599 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	PHTF1	Q9UMS5	762 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	SUFU	Q9UMX1	484 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	ST14	Q9Y5Y6	855 aa		13.54	□□□□□ -0.24
CPNE2-208	ENST00000566910	SETX	Q7Z333	2677 aa	Known RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	PRAMEF33	A0A0G2JMD5	474 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	TMX2-CTNND1	H3BSU7	103 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	PYCARD-AS1	I3L0S3	204 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	PDE2A	O00408	941 aa	Predicted RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	PRAMEF10	O60809	474 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	PGLS	O95336	258 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	ECEL1	O95672	775 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	ALDH4A1	P30038	563 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	HSPA9	P38646	679 aa	Known RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	MLLT3	P42568	568 aa	Predicted RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	CDH6	P55285	790 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	CDK3	Q00526	305 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	B4GALNT1	Q00973	533 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	SLC25A11	Q02978	314 aa	Known RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	ZFP36L1	Q07352	338 aa	Known RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	EIF3I	Q13347	325 aa	Known RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	PIGH	Q14442	188 aa	Predicted RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	KRT81	Q14533	505 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	NFKBIB	Q15653	356 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	TSR1	Q2NL82	804 aa	Known RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	MAP9	Q49MG5	647 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	ARMC12	Q5T9G4	340 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	MARC1	Q5VT66	337 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	USP53	Q70EK8	1073 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	ZFAND4	Q86XD8	727 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	CBARP	Q8N350	705 aa	Predicted RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	BBS5	Q8N3I7	341 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	NSMCE1	Q8WV22	266 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	SNRNP27	Q8WVK2	155 aa	Known RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	USP7	Q93009	1102 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	SEMA3C	Q99985	751 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	TEX101	Q9BY14	249 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	TAAR2	Q9P1P5	351 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	TMEM98	Q9Y2Y6	226 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	PCDHGA7	Q9Y5G6	932 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910	BOD1L1	Q8NFC6	3051 aa		13.53	□□□□□ -0.24
CPNE2-208	ENST00000566910		A0A087X0T9	212 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	RHPN2P1	A8MT19	583 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	NUDT21	O43809	227 aa	Known RBP	13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	MFSD11	O43934	449 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	FAM228B	P0C875	321 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	PNLIP	P16233	465 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	IL4R	P24394	825 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	GPR1	P46091	355 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	FANCC	Q00597	558 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	CTBS	Q01459	385 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	IHH	Q14623	411 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	C16orf72	Q14CZ0	275 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	FAM182A	Q5T1J6	154 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	NKAIN2	Q5VXU1	208 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	TRIM74	Q86UV6	250 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	VASH2	Q86V25	355 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	SLITRK4	Q8IW52	837 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	RCBTB1	Q8NDN9	531 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	KIAA1524	Q8TCG1	905 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	TEKT4	Q8WW24	435 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	PIH1D2	Q8WWB5	315 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	SCRN2	Q96FV2	425 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	WBP1	Q96G27	269 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	NUDT22	Q9BRQ3	303 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	FUCA2	Q9BTY2	467 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	GSDMC	Q9BYG8	508 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	FOXJ2	Q9P0K8	574 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	IP6K2	Q9UHH9	426 aa		13.52	□□□□□ -0.25
CPNE2-208	ENST00000566910	TRBV23OR9-2	A0A075B6M9	112 aa		13.51	□□□□□ -0.25
CPNE2-208	ENST00000566910		A0A1W2PQ67	120 aa		13.51	□□□□□ -0.25
CPNE2-208	ENST00000566910	NVL	O15381	856 aa	Known RBP	13.51	□□□□□ -0.25
CPNE2-208	ENST00000566910	CCL4	P13236	92 aa		13.51	□□□□□ -0.25
CPNE2-208	ENST00000566910	SERPINB6	P35237	376 aa		13.51	□□□□□ -0.25
CPNE2-208	ENST00000566910	ADCY8	P40145	1251 aa		13.51	□□□□□ -0.25
CPNE2-208	ENST00000566910	DSC2	Q02487	901 aa		13.51	□□□□□ -0.25
CPNE2-208	ENST00000566910	ILF3	Q12906	894 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
CPNE2-208	ENST00000566910	LRRC66	Q68CR7	880 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms