RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ST8SIA6P61647 398 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TGFB2P61812 414 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 KCNJ10P78508 379 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TFAP4Q01664 338 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 GRIK3Q13003 919 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 PPIGQ13427 754 aaKnown RBP eCLIP3.37□□□□□ -1.873e-7■■□□□ 11.9
HERPUD1-211ENST00000566550 GAB1Q13480 694 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TRA2AQ13595 282 aaKnown RBP eCLIP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 NFYCQ13952 458 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 HLXQ14774 488 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 PGM5Q15124 567 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 RPS6KA1Q15418 735 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 CYP1B1Q16678 543 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 GLIPR1L2Q4G1C9 344 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM102AQ5T9C2 384 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM91A1Q658Y4 838 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 HIST2H2BCQ6DN03 193 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 HIST2H2BDQ6DRA6 164 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 CES5AQ6NT32 575 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ANKRD16Q6P6B7 361 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 CRIP3Q6Q6R5 217 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 MOXD1Q6UVY6 613 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ZBTB49Q6ZSB9 765 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 LPCAT2Q7L5N7 544 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 MAPKAPK5Q8IW41 473 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 LGI4Q8N135 537 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM109AQ8N4B1 249 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 OTUD6BQ8N6M0 293 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 PNPLA1Q8N8W4 532 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 UXS1Q8NBZ7 420 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TSPAN14Q8NG11 270 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 OR14L1PQ8NHC6 308 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 FAM110DQ8TAY7 271 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 GRAPLQ8TC17 118 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 URGCPQ8TCY9 931 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SGCDQ92629 289 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 CTHRC1Q96CG8 243 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 BSCL2Q96G97 398 aaPredicted RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ZC3HAV1LQ96H79 300 aaKnown RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ERO1AQ96HE7 468 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 RMDN2Q96LZ7 410 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 LRRC37BQ96QE4 947 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 OSBPL9Q96SU4 736 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 PARK7Q99497 189 aaKnown RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 NTPCRQ9BSD7 190 aaKnown RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 C1QTNF5Q9BXJ0 243 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 C1QTNF1Q9BXJ1 281 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 AMBRA1Q9C0C7 1298 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 GPR88Q9GZN0 384 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 NUAK2Q9H093 628 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 HSD3B7Q9H2F3 369 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TASP1Q9H6P5 420 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TMEM206Q9H813 350 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SFXN1Q9H9B4 322 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SYTL2Q9HCH5 934 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 BPIFA1Q9NP55 256 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TAS2R14Q9NYV8 317 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ERAP1Q9NZ08 941 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SPASTQ9UBP0 616 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 DDX25Q9UHL0 483 aaKnown RBP3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC24A2Q9UI40 661 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 HACL1Q9UJ83 578 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 GMEB2Q9UKD1 530 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ITGA11Q9UKX5 1188 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 TSC22D4Q9Y3Q8 395 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 KIF3AQ9Y496 699 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 CLCA3PQ9Y6N3 262 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 SPATA31A3Q5VYP0 1347 aa3.37□□□□□ -1.87
HERPUD1-211ENST00000566550 ADGRL1O94910 1474 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TRGV11A0A075B6L2 103 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 A0A0A6YYC8 382 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 OOEPA6NGQ2 149 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CGB1A6NKQ9 187 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 MAGEB17A8MXT2 336 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 H0YCG3 227 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 I3L1I5 382 aaPredicted RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC16A3O15427 465 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 ATP2C2O75185 946 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CRCPO75575 148 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 AKAP3O75969 853 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 RSL1D1O76021 490 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 CNTN5O94779 1100 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 PTBP3O95758 552 aaKnown RBP3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TSPY4P0CV99 314 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TSPY10P0CW01 314 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 TPBGLP0DKB5 382 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 VPREB1P12018 145 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 FCGR2AP12318 317 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 PRG2P13727 222 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 IGFBP2P18065 325 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 KRT4P19013 534 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 DRD4P21917 467 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 RPA1P27694 616 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 PCGF2P35227 344 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 ADRA1BP35368 520 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SLC16A2P36021 539 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 GABRB2P47870 512 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 FASLGP48023 281 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 SULT1E1P49888 294 aa3.36□□□□□ -1.87
HERPUD1-211ENST00000566550 DIO1P49895 249 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms