RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 TRIM72Q6ZMU5 477 aa12.75□□□□□ -0.37
RNF40-208ENST00000565995 ARHGAP22Q7Z5H3 698 aa12.75□□□□□ -0.37
RNF40-208ENST00000565995 C3orf20Q8ND61 904 aa12.75□□□□□ -0.37
RNF40-208ENST00000565995 SLC20A1Q8WUM9 679 aa12.75□□□□□ -0.37
RNF40-208ENST00000565995 ABHD17AQ96GS6 310 aa12.75□□□□□ -0.37
RNF40-208ENST00000565995 NSMCE3Q96MG7 304 aa12.75□□□□□ -0.37
RNF40-208ENST00000565995 ZPBPQ9BS86 351 aa12.75□□□□□ -0.37
RNF40-208ENST00000565995 NAT10Q9H0A0 1025 aaKnown RBP12.75□□□□□ -0.37
RNF40-208ENST00000565995 CARS2Q9HA77 564 aaKnown RBP12.75□□□□□ -0.37
RNF40-208ENST00000565995 FBXO8Q9NRD0 319 aa12.75□□□□□ -0.37
RNF40-208ENST00000565995 PHPT1Q9NRX4 125 aaPredicted RBP12.75□□□□□ -0.37
RNF40-208ENST00000565995 SLC17A4Q9Y2C5 497 aa12.75□□□□□ -0.37
RNF40-208ENST00000565995 TMEM184BQ9Y519 407 aaPredicted RBP12.75□□□□□ -0.37
RNF40-208ENST00000565995 LRBAP50851 2863 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 A0A1W2PQ67 120 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 FAM170AA1A519 330 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 IVLP07476 585 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 AK4P27144 223 aaPredicted RBP12.74□□□□□ -0.37
RNF40-208ENST00000565995 FASLGP48023 281 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 ZNF143P52747 638 aaPredicted RBP12.74□□□□□ -0.37
RNF40-208ENST00000565995 JAM2P57087 298 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 CTBSQ01459 385 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 BCL2L1Q07817 233 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 RFTN1Q14699 578 aaPredicted RBP12.74□□□□□ -0.37
RNF40-208ENST00000565995 WDR74Q6RFH5 385 aaPredicted RBP12.74□□□□□ -0.37
RNF40-208ENST00000565995 PHF13Q86YI8 300 aaPredicted RBP12.74□□□□□ -0.37
RNF40-208ENST00000565995 NLGN4XQ8N0W4 816 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 NLGN4YQ8NFZ3 816 aaPredicted RBP12.74□□□□□ -0.37
RNF40-208ENST00000565995 SLC30A5Q8TAD4 765 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 APOBEC4Q8WW27 367 aaKnown RBP12.74□□□□□ -0.37
RNF40-208ENST00000565995 PATE1Q8WXA2 126 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 RTP4Q96DX8 246 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 C11orf70Q9BRQ4 267 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 SLC39A8Q9C0K1 460 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 TRIT1Q9H3H1 467 aaKnown RBP12.74□□□□□ -0.37
RNF40-208ENST00000565995 SUFUQ9UMX1 484 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 CREBBPQ92793 2442 aa12.74□□□□□ -0.37
RNF40-208ENST00000565995 LOC101059948A0A1B0GTJ6 334 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 ARHGAP42A6NI28 874 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 EIF3CLB5ME19 914 aaKnown RBP12.73□□□□□ -0.37
RNF40-208ENST00000565995 TEX33O43247 280 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 CCP110O43303 1012 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 HTRA2O43464 458 aaPredicted RBP12.73□□□□□ -0.37
RNF40-208ENST00000565995 CREB3O43889 395 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 PALMO75781 387 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 ERCC5P28715 1186 aaPredicted RBP12.73□□□□□ -0.37
RNF40-208ENST00000565995 ADCY8P40145 1251 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 PAPOLAP51003 745 aaKnown RBP12.73□□□□□ -0.37
RNF40-208ENST00000565995 CDK3Q00526 305 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 MC1RQ01726 317 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 DPTQ07507 201 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 CDC20Q12834 499 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 KLRB1Q12918 225 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 MAP7Q14244 749 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 ACOX1Q15067 660 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 C4orf17Q53FE4 359 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 PPP1R15BQ5SWA1 713 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 NKAIN2Q5VXU1 208 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 ANKS6Q68DC2 871 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 CEACAM20Q6UY09 585 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 TIPARPQ7Z3E1 657 aaKnown RBP12.73□□□□□ -0.37
RNF40-208ENST00000565995 PHLDB2Q86SQ0 1253 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 HEATR4Q86WZ0 1026 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 NUS1Q96E22 293 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 PSKH2Q96QS6 385 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 PCDHB18PQ96TA0 734 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 EIF3CQ99613 913 aaKnown RBP12.73□□□□□ -0.37
RNF40-208ENST00000565995 GPN2Q9H9Y4 310 aaPredicted RBP12.73□□□□□ -0.37
RNF40-208ENST00000565995 ZNF71Q9NQZ8 489 aaPredicted RBP12.73□□□□□ -0.37
RNF40-208ENST00000565995 ADAM22Q9P0K1 906 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 TMEM9Q9P0T7 183 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 MOSPD1Q9UJG1 213 aa12.73□□□□□ -0.37
RNF40-208ENST00000565995 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.72□□□□□ -0.37
RNF40-208ENST00000565995 EFCAB7A8K855 629 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 PSMD11O00231 422 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 DUX1O43812 170 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 GFPT2O94808 682 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 CALB1P05937 261 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 OAS2P29728 719 aaKnown RBP12.72□□□□□ -0.37
RNF40-208ENST00000565995 GNPDA1P46926 289 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 RENBPP51606 427 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 AP1S1P61966 158 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 IL10RBQ08334 325 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 CNGA3Q16281 694 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 LACTB2Q53H82 288 aaPredicted RBP12.72□□□□□ -0.37
RNF40-208ENST00000565995 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.72□□□□□ -0.37
RNF40-208ENST00000565995 SLC30A9Q6PML9 568 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 NLRP8Q86W28 1048 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 ARHGAP12Q8IWW6 846 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 PTCD2Q8WV60 388 aaKnown RBP12.72□□□□□ -0.37
RNF40-208ENST00000565995 KIAA1143Q96AT1 154 aaPredicted RBP12.72□□□□□ -0.37
RNF40-208ENST00000565995 DTD2Q96FN9 168 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 SELENOOQ9BVL4 669 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 GANQ9H2C0 597 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 KCNK4Q9NYG8 393 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 B4GALT6Q9UBX8 382 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 PLAAQ9Y263 795 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 PPIL1Q9Y3C6 166 aa12.72□□□□□ -0.37
RNF40-208ENST00000565995 BLACEA4D250 179 aa12.71□□□□□ -0.37
RNF40-208ENST00000565995 PRR19A6NJB7 356 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms