RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 HDAC11Q96DB2 347 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 FCRL3Q96P31 734 aaPredicted RBP19.85■□□□□ 0.77
CLN6-206ENST00000565471 BBC3Q96PG8 261 aaPredicted RBP19.85■□□□□ 0.77
CLN6-206ENST00000565471 TDRD1Q9BXT4 1180 aaKnown RBP19.85■□□□□ 0.77
CLN6-206ENST00000565471 LRRN3Q9H3W5 708 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 CARS2Q9HA77 564 aaKnown RBP19.85■□□□□ 0.77
CLN6-206ENST00000565471 TRNAU1APQ9NX07 287 aaKnown RBP19.85■□□□□ 0.77
CLN6-206ENST00000565471 DNPEPQ9ULA0 475 aa19.85■□□□□ 0.77
CLN6-206ENST00000565471 A0A0J9YYE9 177 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 A0A1W2PQM1 296 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 CDRT15L2A8MXV6 281 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 ZNF487B1APH4 448 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 MAP3K6O95382 1288 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 TRBC1P01850 177 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 RPLP0P05388 317 aaKnown RBP19.84■□□□□ 0.77
CLN6-206ENST00000565471 TPM1P09493 284 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 CCNB1P14635 433 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 CA4P22748 312 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 CCL7P80098 99 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 SKOR1P84550 965 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 DSC2Q02487 901 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 GBE1Q04446 702 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 HLTFQ14527 1009 aaKnown RBP eCLIP19.84■□□□□ 0.77
CLN6-206ENST00000565471 PTPRRQ15256 657 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 LRRC66Q68CR7 880 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 RAET1GQ6H3X3 334 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 NLRP8Q86W28 1048 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 VSTM4Q8IW00 320 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 RAVER1Q8IY67 606 aaKnown RBP19.84■□□□□ 0.77
CLN6-206ENST00000565471 ARL14Q8N4G2 192 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 CCL4L1Q8NHW4 92 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 ARRDC2Q8TBH0 407 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 KIAA1524Q8TCG1 905 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 KCNE4Q8WWG9 221 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 GSDMCQ9BYG8 508 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 DPH1Q9BZG8 443 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 DPEP2Q9H4A9 486 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 ABHD10Q9NUJ1 306 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 SLC17A4Q9Y2C5 497 aa19.84■□□□□ 0.77
CLN6-206ENST00000565471 B4DGG1 531 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 NUDT21O43809 227 aaKnown RBP19.83■□□□□ 0.77
CLN6-206ENST00000565471 KDELR1P24390 212 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 CCKBRP32239 447 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 EPHB1P54762 984 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 UCNP55089 124 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 RPL26P61254 145 aaKnown RBP19.83■□□□□ 0.77
CLN6-206ENST00000565471 ILF3Q12906 894 aaKnown RBP eCLIP19.83■□□□□ 0.77
CLN6-206ENST00000565471 COL9A2Q14055 689 aaPredicted RBP19.83■□□□□ 0.77
CLN6-206ENST00000565471 IHHQ14623 411 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 ZFYVE27Q5T4F4 411 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 BROXQ5VW32 411 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 ZNF765Q7L2R6 523 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 GPR155Q7Z3F1 870 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 CLEC14AQ86T13 490 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 VSIG1Q86XK7 387 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 CCNJLQ8IV13 435 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 RAPGEF5Q92565 580 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 ZNF830Q96NB3 372 aaPredicted RBP19.83■□□□□ 0.77
CLN6-206ENST00000565471 TMEM74Q96NL1 305 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 RNF157Q96PX1 679 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 STRADBQ9C0K7 418 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 DTLQ9NZJ0 730 aa19.83■□□□□ 0.77
CLN6-206ENST00000565471 RPL26L1Q9UNX3 145 aaKnown RBP19.83■□□□□ 0.77
CLN6-206ENST00000565471 IGSF10Q6WRI0 2623 aa19.83■□□□□ 0.76
CLN6-206ENST00000565471 GOLGA6CA6NDK9 693 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 GOLGA6BA6NDN3 693 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 CAPN8A6NHC0 703 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 MFAP3LO75121 409 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 MTA2O94776 668 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 SOD1P00441 154 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 FUCA1P04066 466 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 HLA-DQB2P05538 268 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 PYGLP06737 847 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 IVLP07476 585 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 ITGA2BP08514 1039 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 GOLGA6DP0CG33 693 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 ARHGAP25P42331 645 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 GPR1P46091 355 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 PTSQ03393 145 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 SLC10A2Q12908 348 aaPredicted RBP19.82■□□□□ 0.76
CLN6-206ENST00000565471 MESDQ14696 234 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 ADAMTSL4Q6UY14 1074 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 SPRED1Q7Z699 444 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 B3GNT8Q7Z7M8 397 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 C17orf82Q86X59 251 aaPredicted RBP19.82■□□□□ 0.76
CLN6-206ENST00000565471 CCDC13Q8IYE1 715 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 SLC35G2Q8TBE7 412 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 AP2M1Q96CW1 435 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 CCDC97Q96F63 343 aaPredicted RBP19.82■□□□□ 0.76
CLN6-206ENST00000565471 SCARF2Q96GP6 870 aaPredicted RBP19.82■□□□□ 0.76
CLN6-206ENST00000565471 NAF1Q96HR8 494 aaKnown RBP19.82■□□□□ 0.76
CLN6-206ENST00000565471 LYSMD1Q96S90 227 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 ABCG8Q9H221 673 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 TSPY26PQ9H489 355 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 GOLGA6AQ9NYA3 693 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 LRIT1Q9P2V4 623 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 SUFUQ9UMX1 484 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 CHKBQ9Y259 395 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 TTLL3Q9Y4R7 772 aa19.82■□□□□ 0.76
CLN6-206ENST00000565471 RNF215Q9Y6U7 377 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms