RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SLC22A17Q8WUG5 538 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 DCAKDQ8WVC6 231 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 IPCEF1Q8WWN9 437 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 DEDD2Q8WXF8 326 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ST8SIA4Q92187 359 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SLC7A6Q92536 515 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 GTF3AQ92664 365 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 HDAC2Q92769 488 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ATOH1Q92858 354 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 USP13Q92995 863 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 KIAA1191Q96A73 305 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 E2F7Q96AV8 911 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 NUDT16Q96DE0 195 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 C19orf60Q96EN9 201 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CHFRQ96EP1 664 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 FAM89AQ96GI7 184 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SLC45A3Q96JT2 553 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CLPTM1LQ96KA5 538 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SIGLEC10Q96LC7 697 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 RNF145Q96MT1 663 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 SEC22CQ9BRL7 303 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TBCDQ9BTW9 1192 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ADI1Q9BV57 179 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 GSDMCQ9BYG8 508 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ASPSCR1Q9BZE9 553 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ZYG11BQ9C0D3 744 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ALX4Q9H161 411 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 UPF3AQ9H1J1 476 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 MUC13Q9H3R2 512 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 DSN1Q9H410 356 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TFB2MQ9H5Q4 396 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 XKR8Q9H6D3 395 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 LRRC40Q9H9A6 602 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 COPRSQ9NQ92 184 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PAK6Q9NQU5 681 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ABCC13Q9NSE7 274 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 C19orf12Q9NSK7 152 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 IMP3Q9NV31 184 aaKnown RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 DNAJC11Q9NVH1 559 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 MTMR4Q9NYA4 1195 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TAS2R9Q9NYW1 312 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF624Q9P2J8 865 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 HECAQ9UBI9 543 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ASH2LQ9UBL3 628 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CPNE7Q9UBL6 633 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 CHORDC1Q9UHD1 332 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 DCDC2Q9UHG0 476 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 ELF5Q9UKW6 265 aaPredicted RBP6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PLCL2Q9UPR0 1127 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 MGAT4BQ9UQ53 548 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PCDHAC2Q9Y5I4 1007 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 PEX16Q9Y5Y5 336 aa6.3□□□□□ -1.4
PTPN9-204ENST00000564970 TRAV20A0A0B4J274 112 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 A0A0X1KG70 313 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 KRT87PA6NCN2 255 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 TRIM49BA6NDI0 452 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 AGAP5A6NIR3 686 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF729A6NN14 1252 aaPredicted RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 PRRT4C9JH25 899 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 POC1B-GALNT4F8VUJ3 575 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 NDUFS8O00217 210 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 AIM2O14862 343 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 SLC30A4O14863 429 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 TRIM24O15164 1050 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 SLC7A4O43246 635 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 SIGLEC6O43699 453 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 DTNBO60941 627 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 RBBP9O75884 186 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 OR2B3O76000 313 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 FTH1P02794 183 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MT-ND3P03897 115 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 HEXBP07686 556 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MYL3P08590 195 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 LTA4HP09960 611 aaKnown RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 COX4I1P13073 169 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 PLS3P13797 630 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 SLC5A1P13866 664 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 GNSP15586 552 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 TIMP2P16035 220 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 XRCC1P18887 633 aaPredicted RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 FGFR3P22607 806 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 EEF1B2P24534 225 aaKnown RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ADRA1DP25100 572 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 IVDP26440 423 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 CALML3P27482 149 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 SOX11P35716 441 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ATP6V1E1P36543 226 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 CD96P40200 585 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 CD79BP40259 229 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ETV5P41161 510 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 MCAMP43121 646 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 CAPZA2P47755 286 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 CPA2P48052 419 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 SOX9P48436 509 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 KCNC1P48547 511 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 POU3F4P49335 361 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 KLK7P49862 253 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 SUCLG1P53597 346 aaKnown RBP6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ITGA8P53708 1063 aa6.29□□□□□ -1.4
PTPN9-204ENST00000564970 ATP12AP54707 1039 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms