RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CDKN3Q16667 212 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 C6orf89Q6UWU4 347 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 USP45Q70EL2 814 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 TBC1D1Q86TI0 1168 aaPredicted RBP19.54■□□□□ 0.72
CLN6-205ENST00000564846 ZSWIM9Q86XI8 627 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 CENPLQ8N0S6 344 aaPredicted RBP19.54■□□□□ 0.72
CLN6-205ENST00000564846 RDH11Q8TC12 318 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 SORCS1Q8WY21 1168 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 EID2BQ96D98 161 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 OLFM1Q99784 485 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 HEPHQ9BQS7 1158 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 BPIFA1Q9NP55 256 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 LMCD1Q9NZU5 365 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 RUVBL2Q9Y230 463 aaKnown RBP19.54■□□□□ 0.72
CLN6-205ENST00000564846 ARL2BPQ9Y2Y0 163 aa19.54■□□□□ 0.72
CLN6-205ENST00000564846 NDUFS3O75489 264 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 SLC26A3P40879 764 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 TTPAP49638 278 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 ST8SIA6P61647 398 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 POLR2LP62875 67 aaKnown RBP19.53■□□□□ 0.72
CLN6-205ENST00000564846 XIAPP98170 497 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 BST1Q10588 318 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 ZNF460Q14592 562 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 PTPRNQ16849 979 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 GAB4Q2WGN9 574 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 GRAMD4Q6IC98 578 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 VITQ6UXI7 678 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 GDPD4Q6W3E5 623 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 PNPLA1Q8N8W4 532 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 CHST14Q8NCH0 376 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 PPP1R14CQ8TAE6 165 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 KCTD4Q8WVF5 259 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 HPS4Q9NQG7 708 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 ELOVL2Q9NXB9 296 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 CLEC1BQ9P126 229 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 CDH23Q9H251 3354 aa19.53■□□□□ 0.72
CLN6-205ENST00000564846 TTC34A8MYJ7 566 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 TGDSO95455 350 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 UGT2B4P06133 528 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 TROVE2P10155 538 aaKnown RBP eCLIP19.52■□□□□ 0.72
CLN6-205ENST00000564846 EIF4HQ15056 248 aaKnown RBP19.52■□□□□ 0.72
CLN6-205ENST00000564846 ZRANB3Q5FWF4 1079 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 ZNF549Q6P9A3 640 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 BRAT1Q6PJG6 821 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 TPRG1Q6ZUI0 275 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 TNS4Q8IZW8 715 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 CPA6Q8N4T0 437 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 MYLIPQ8WY64 445 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 LPGAT1Q92604 370 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 LRIG1Q96JA1 1093 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 C7orf26Q96N11 449 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 MCCC1Q96RQ3 725 aaPredicted RBP19.52■□□□□ 0.72
CLN6-205ENST00000564846 S1PR5Q9H228 398 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 ZNF576Q9H609 170 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 POPDC3Q9HBV1 291 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 GPAMQ9HCL2 828 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 KLHL14Q9P2G3 628 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 PLA2G4CQ9UP65 541 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 SLC30A1Q9Y6M5 507 aa19.52■□□□□ 0.72
CLN6-205ENST00000564846 OTOL1A6NHN0 477 aaPredicted RBP19.52■□□□□ 0.71
CLN6-205ENST00000564846 PRSS56P0CW18 603 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 KCNA4P22459 653 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 PGGT1BP53609 377 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 CACNG1Q06432 222 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 SF3A3Q12874 501 aaKnown RBP eCLIP19.52■□□□□ 0.71
CLN6-205ENST00000564846 STX3Q13277 289 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 FAM83EQ2M2I3 478 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 C10orf107Q8IVU9 208 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 YAF2Q8IY57 180 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 CBARPQ8N350 705 aaPredicted RBP19.52■□□□□ 0.71
CLN6-205ENST00000564846 KDM1BQ8NB78 822 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 SREK1Q8WXA9 508 aaKnown RBP19.52■□□□□ 0.71
CLN6-205ENST00000564846 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.52■□□□□ 0.71
CLN6-205ENST00000564846 RIPOR3Q96MK2 946 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 AARSD1Q9BTE6 412 aaKnown RBP19.52■□□□□ 0.71
CLN6-205ENST00000564846 OSBPL1AQ9BXW6 950 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 APPL1Q9UKG1 709 aa19.52■□□□□ 0.71
CLN6-205ENST00000564846 ATXN2Q99700 1313 aaKnown RBP19.51■□□□□ 0.71
CLN6-205ENST00000564846 A0A0U1RQS6 177 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 G3V2L1 256 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 SNNO75324 88 aaPredicted RBP19.51■□□□□ 0.71
CLN6-205ENST00000564846 CLDN7O95471 211 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 SERPINE1P05121 402 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 FGF3P11487 239 aaPredicted RBP19.51■□□□□ 0.71
CLN6-205ENST00000564846 FDXRP22570 491 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 GRK2P25098 689 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 SLC6A11P48066 632 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 SUOXP51687 545 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 PTPN5P54829 565 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 CDKN2DP55273 166 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 IFT88Q13099 833 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 CERS6Q6ZMG9 384 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 PIANPQ8IYJ0 282 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 FSTL5Q8N475 847 aaPredicted RBP19.51■□□□□ 0.71
CLN6-205ENST00000564846 UBXN10Q96LJ8 280 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 KLHL32Q96NJ5 620 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 GPR78Q96P69 363 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 MYADMQ96S97 322 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 CCDC68Q9H2F9 335 aa19.51■□□□□ 0.71
CLN6-205ENST00000564846 THAP1Q9NVV9 213 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms