RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 A0A1W2PQM1 296 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 SYCE3A1L190 88 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 TTC24A2A3L6 582 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 NVLO15381 856 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 FZD6O60353 706 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 CEACAM5P06731 702 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 IVLP07476 585 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 KRT7P08729 469 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 H2AFZP0C0S5 128 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 TCF4P15884 667 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 ETV3P41162 512 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 SSR1P43307 286 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 GPR3P46089 330 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 CDK3Q00526 305 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 TRAF2Q12933 501 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 SPECC1LQ69YQ0 1117 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 TXNRD3NBQ6F5E7 133 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 H2AFVQ71UI9 128 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 ZNF765Q7L2R6 523 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 HSD11B1LQ7Z5J1 315 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 TECPR1Q7Z6L1 1165 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 HEATR4Q86WZ0 1026 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 NRSN1Q8IZ57 195 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 ZNF564Q8TBZ8 553 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 SEMA3CQ99985 751 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 ZNF670Q9BS34 389 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 FRMD8Q9BZ67 464 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 CARS2Q9HA77 564 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 NT5MQ9NPB1 228 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 MRPL40Q9NQ50 206 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 AKAP7Q9P0M2 348 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 RABGEF1Q9UJ41 708 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 MOSPD1Q9UJG1 213 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 SLC17A4Q9Y2C5 497 aa12.17□□□□□ -0.46
GTF3C1-204ENST00000564664 ARHGEF17Q96PE2 2063 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 NPIPB15A6NHN6 443 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 PROSCO94903 275 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 LHCGRP22888 699 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 MAN1A1P33908 653 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 UGT1A5P35504 534 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 MAXP61244 160 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 ITKQ08881 620 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 SQSTM1Q13501 440 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 DPYSL3Q14195 570 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 NR1D2Q14995 579 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 ANKRD20A8PQ5CZ79 823 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 RAET1GQ6H3X3 334 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 ADAMTSL4Q6UY14 1074 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 Q6ZVL8 140 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 ZNF438Q7Z4V0 828 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 SPRED1Q7Z699 444 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 ZDHHC1Q8WTX9 485 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 BTBD6Q96KE9 485 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 CMKLR1Q99788 373 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 DPYSL5Q9BPU6 564 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 SYNDIG1Q9H7V2 258 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 EPB41L5Q9HCM4 733 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 RBM22Q9NW64 420 aaKnown RBP eCLIP12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 NENFQ9UMX5 172 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 RNF215Q9Y6U7 377 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 COL27A1Q8IZC6 1860 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
GTF3C1-204ENST00000564664 LRP4O75096 1905 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 A0A0J9YYE9 177 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 RGSL1A5PLK6 1076 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 RHPN2P1A8MT19 583 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 ZNF487B1APH4 448 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 K7ENP7 123 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 CPNE6O95741 557 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 TRBC1P01850 177 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 GYPCP04921 128 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 FGF1P05230 155 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 JMJD7P0C870 316 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 CD82P27701 267 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 GPR1P46091 355 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 EPHB1P54762 984 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 B4GALNT1Q00973 533 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 PTSQ03393 145 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 LRP8Q14114 963 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 TRIM14Q14142 442 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 SLC18A3Q16572 532 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 ARHGAP40Q5TG30 622 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 DENND2CQ68D51 928 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 KCTD16Q68DU8 428 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 NCBP2-AS2Q69YL0 99 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 INO80CQ6PI98 192 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 FOXR1Q6PIV2 292 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 XKR5Q6UX68 686 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 CCDC81Q6ZN84 652 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 B3GNT8Q7Z7M8 397 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 PIM3Q86V86 326 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 VSIG1Q86XK7 387 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 NRROSQ86YC3 692 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 PELI3Q8N2H9 469 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 Q8N9G6 341 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 OR8K1Q8NGG5 319 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 EXD1Q8NHP7 514 aa12.15□□□□□ -0.46
GTF3C1-204ENST00000564664 CTNNBL1Q8WYA6 563 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms